Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 RPS2P28-201ENST00000314255 741 ntBASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 AL160237.2-201ENST00000556165 472 ntBASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 AL589182.2-201ENST00000619332 1049 ntBASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRIM62Q9BVG3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 ACTG1P4-201ENST00000425123 1122 ntBASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 KRT18P67-201ENST00000432816 1264 ntBASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 AL662844.1-201ENST00000546340 181 ntBASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 SART3-203ENST00000546611 1184 ntBASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 MTDHP4-201ENST00000600287 670 ntBASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 AL031008.1-201ENST00000619963 541 ntBASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 NCF1C-201ENST00000438382 1427 ntBASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms