Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 KRT18P65-201ENST00000439811 1286 ntBASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 AC106886.4-201ENST00000623557 2502 ntBASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 COX11P1-201ENST00000489116 835 ntBASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 GCSHP2-201ENST00000560971 527 ntBASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
THUMPD3Q9BV44 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 AC073508.3-201ENST00000619697 1419 ntBASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 KRT8P47-201ENST00000604727 1398 ntBASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
THUMPD3Q9BV44 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms