Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 TP73-AS1-210ENST00000637775 1455 ntBASIC15.67■□□□□ 0.1
USB1Q9BQ65 ESPNP-201ENST00000270691 2015 ntBASIC15.67■□□□□ 0.1
USB1Q9BQ65 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 NUS1P2-201ENST00000417358 873 ntBASIC15.67■□□□□ 0.1
USB1Q9BQ65 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 AC096582.2-201ENST00000510860 516 ntBASIC15.67■□□□□ 0.1
USB1Q9BQ65 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 AL662844.1-201ENST00000546340 181 ntBASIC15.67■□□□□ 0.1
USB1Q9BQ65 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 AC011467.2-201ENST00000598425 242 ntBASIC15.67■□□□□ 0.1
USB1Q9BQ65 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 AL732292.2-201ENST00000609649 430 ntBASIC15.67■□□□□ 0.1
USB1Q9BQ65 REXO1L6P-202ENST00000619970 1078 ntBASIC15.67■□□□□ 0.1
USB1Q9BQ65 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 AC103702.1-201ENST00000548801 2630 ntBASIC15.67■□□□□ 0.1
USB1Q9BQ65 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.67■□□□□ 0.1
USB1Q9BQ65 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.67■□□□□ 0.1
USB1Q9BQ65 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
USB1Q9BQ65 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.66■□□□□ 0.1
USB1Q9BQ65 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.66■□□□□ 0.1
USB1Q9BQ65 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.66■□□□□ 0.1
USB1Q9BQ65 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.66■□□□□ 0.1
USB1Q9BQ65 AC092850.2-201ENST00000623821 2697 ntBASIC15.66■□□□□ 0.1
USB1Q9BQ65 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
USB1Q9BQ65 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.66■□□□□ 0.1
USB1Q9BQ65 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.66■□□□□ 0.1
USB1Q9BQ65 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.66■□□□□ 0.1
USB1Q9BQ65 AC093010.1-201ENST00000473625 1624 ntBASIC15.66■□□□□ 0.1
USB1Q9BQ65 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.66■□□□□ 0.1
USB1Q9BQ65 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 RBM17P3-201ENST00000417687 1192 ntBASIC15.66■□□□□ 0.1
USB1Q9BQ65 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 UNC93B7-201ENST00000509439 705 ntBASIC15.66■□□□□ 0.1
USB1Q9BQ65 AL160237.2-201ENST00000556165 472 ntBASIC15.66■□□□□ 0.1
USB1Q9BQ65 AL121912.1-201ENST00000603683 238 ntBASIC15.66■□□□□ 0.1
USB1Q9BQ65 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.66■□□□□ 0.1
USB1Q9BQ65 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
USB1Q9BQ65 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
USB1Q9BQ65 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USB1Q9BQ65 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
USB1Q9BQ65 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms