Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.96■□□□□ 0.79
ARID3AQ99856 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARID3AQ99856 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ARID3AQ99856 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ARID3AQ99856 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ARID3AQ99856 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ARID3AQ99856 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARID3AQ99856 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.96■□□□□ 0.79
ARID3AQ99856 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.95■□□□□ 0.78
ARID3AQ99856 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.95■□□□□ 0.78
ARID3AQ99856 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.95■□□□□ 0.78
ARID3AQ99856 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.95■□□□□ 0.78
ARID3AQ99856 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ARID3AQ99856 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.95■□□□□ 0.78
ARID3AQ99856 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.95■□□□□ 0.78
ARID3AQ99856 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.95■□□□□ 0.78
ARID3AQ99856 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
ARID3AQ99856 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
ARID3AQ99856 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.95■□□□□ 0.78
ARID3AQ99856 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ARID3AQ99856 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARID3AQ99856 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.95■□□□□ 0.78
ARID3AQ99856 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.95■□□□□ 0.78
ARID3AQ99856 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
ARID3AQ99856 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ARID3AQ99856 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.94■□□□□ 0.78
ARID3AQ99856 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ARID3AQ99856 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ARID3AQ99856 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
ARID3AQ99856 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ARID3AQ99856 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARID3AQ99856 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARID3AQ99856 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.94■□□□□ 0.78
ARID3AQ99856 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.94■□□□□ 0.78
ARID3AQ99856 AC009947.2-201ENST00000444014 672 ntBASIC19.94■□□□□ 0.78
ARID3AQ99856 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.94■□□□□ 0.78
ARID3AQ99856 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.94■□□□□ 0.78
ARID3AQ99856 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.94■□□□□ 0.78
ARID3AQ99856 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ARID3AQ99856 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARID3AQ99856 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.94■□□□□ 0.78
ARID3AQ99856 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ARID3AQ99856 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ARID3AQ99856 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.94■□□□□ 0.78
ARID3AQ99856 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
ARID3AQ99856 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARID3AQ99856 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ARID3AQ99856 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARID3AQ99856 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.93■□□□□ 0.78
ARID3AQ99856 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ARID3AQ99856 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ARID3AQ99856 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ARID3AQ99856 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.93■□□□□ 0.78
ARID3AQ99856 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.93■□□□□ 0.78
ARID3AQ99856 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.93■□□□□ 0.78
ARID3AQ99856 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
ARID3AQ99856 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.93■□□□□ 0.78
ARID3AQ99856 AC034236.2-201ENST00000606662 1610 ntBASIC19.93■□□□□ 0.78
ARID3AQ99856 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.93■□□□□ 0.78
ARID3AQ99856 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARID3AQ99856 AL662844.4-201ENST00000606367 2838 ntBASIC19.93■□□□□ 0.78
ARID3AQ99856 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.93■□□□□ 0.78
ARID3AQ99856 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.93■□□□□ 0.78
ARID3AQ99856 AP001094.4-201ENST00000579008 2176 ntBASIC19.93■□□□□ 0.78
ARID3AQ99856 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms