Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CCL13Q99616 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
CCL13Q99616 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCL13Q99616 LINC00896-202ENST00000609602 2128 ntBASIC14.66□□□□□ -0.06
CCL13Q99616 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CCL13Q99616 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL13Q99616 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL13Q99616 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CCL13Q99616 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL13Q99616 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCL13Q99616 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 AL450487.1-201ENST00000426799 995 ntBASIC14.66□□□□□ -0.06
CCL13Q99616 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL13Q99616 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL13Q99616 ABCD1P5-201ENST00000445663 754 ntBASIC14.66□□□□□ -0.06
CCL13Q99616 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.66□□□□□ -0.06
CCL13Q99616 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.66□□□□□ -0.06
CCL13Q99616 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCL13Q99616 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.66□□□□□ -0.06
CCL13Q99616 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCL13Q99616 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCL13Q99616 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL13Q99616 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CCL13Q99616 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.66□□□□□ -0.06
CCL13Q99616 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CCL13Q99616 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL13Q99616 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL13Q99616 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL13Q99616 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL13Q99616 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL13Q99616 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCL13Q99616 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL13Q99616 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL13Q99616 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCL13Q99616 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL13Q99616 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CCL13Q99616 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL13Q99616 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL13Q99616 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL13Q99616 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CCL13Q99616 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CCL13Q99616 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.65□□□□□ -0.06
CCL13Q99616 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL13Q99616 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL13Q99616 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.65□□□□□ -0.06
CCL13Q99616 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL13Q99616 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL13Q99616 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL13Q99616 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL13Q99616 KRT126P-201ENST00000549467 1181 ntBASIC14.65□□□□□ -0.06
CCL13Q99616 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.65□□□□□ -0.06
CCL13Q99616 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL13Q99616 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL13Q99616 AP001269.4-201ENST00000609611 512 ntBASIC14.65□□□□□ -0.06
CCL13Q99616 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL13Q99616 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CCL13Q99616 AD001527.2-201ENST00000622994 785 ntBASIC14.65□□□□□ -0.06
CCL13Q99616 AC073592.5-201ENST00000624854 528 ntBASIC14.65□□□□□ -0.06
CCL13Q99616 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL13Q99616 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL13Q99616 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL13Q99616 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL13Q99616 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL13Q99616 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL13Q99616 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL13Q99616 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL13Q99616 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL13Q99616 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL13Q99616 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL13Q99616 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.64□□□□□ -0.07
CCL13Q99616 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL13Q99616 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms