Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.66□□□□□ -0.22
TRGV9Q99603 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRGV9Q99603 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.66□□□□□ -0.22
TRGV9Q99603 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.66□□□□□ -0.22
TRGV9Q99603 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRGV9Q99603 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
TRGV9Q99603 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.66□□□□□ -0.22
TRGV9Q99603 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.65□□□□□ -0.22
TRGV9Q99603 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.65□□□□□ -0.22
TRGV9Q99603 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRGV9Q99603 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
TRGV9Q99603 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRGV9Q99603 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.65□□□□□ -0.22
TRGV9Q99603 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TRGV9Q99603 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TRGV9Q99603 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TRGV9Q99603 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.65□□□□□ -0.22
TRGV9Q99603 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.65□□□□□ -0.22
TRGV9Q99603 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.65□□□□□ -0.22
TRGV9Q99603 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.65□□□□□ -0.22
TRGV9Q99603 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRGV9Q99603 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.65□□□□□ -0.22
TRGV9Q99603 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TRGV9Q99603 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRGV9Q99603 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
TRGV9Q99603 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRGV9Q99603 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV9Q99603 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.64□□□□□ -0.23
TRGV9Q99603 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 AC093525.9-201ENST00000624961 1746 ntBASIC13.64□□□□□ -0.23
TRGV9Q99603 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.64□□□□□ -0.23
TRGV9Q99603 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.64□□□□□ -0.23
TRGV9Q99603 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
TRGV9Q99603 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRGV9Q99603 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.64□□□□□ -0.23
TRGV9Q99603 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.64□□□□□ -0.23
TRGV9Q99603 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRGV9Q99603 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 AC087499.1-201ENST00000418141 1075 ntBASIC13.64□□□□□ -0.23
TRGV9Q99603 BX664615.1-201ENST00000443558 458 ntBASIC13.64□□□□□ -0.23
TRGV9Q99603 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 AC092597.1-201ENST00000487352 616 ntBASIC13.64□□□□□ -0.23
TRGV9Q99603 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.64□□□□□ -0.23
TRGV9Q99603 IGHV3-52-201ENST00000519770 353 ntBASIC13.64□□□□□ -0.23
TRGV9Q99603 AC010203.1-204ENST00000548782 407 ntBASIC13.64□□□□□ -0.23
TRGV9Q99603 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.64□□□□□ -0.23
TRGV9Q99603 AC011558.1-201ENST00000623459 338 ntBASIC13.64□□□□□ -0.23
TRGV9Q99603 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRGV9Q99603 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.64□□□□□ -0.23
TRGV9Q99603 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.64□□□□□ -0.23
TRGV9Q99603 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.64□□□□□ -0.23
TRGV9Q99603 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms