Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
SCAF11Q99590 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
SCAF11Q99590 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC24.91■■□□□ 1.58
SCAF11Q99590 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SCAF11Q99590 PI4KAP1-204ENST00000612579 1703 ntBASIC24.9■■□□□ 1.58
SCAF11Q99590 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
SCAF11Q99590 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SCAF11Q99590 VMA21-202ENST00000370361 693 ntTSL 5 BASIC24.9■■□□□ 1.58
SCAF11Q99590 CENPM-205ENST00000404067 905 ntTSL 3 BASIC24.9■■□□□ 1.58
SCAF11Q99590 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC24.9■■□□□ 1.58
SCAF11Q99590 KLF2P3-201ENST00000451977 1087 ntBASIC24.9■■□□□ 1.58
SCAF11Q99590 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
SCAF11Q99590 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC24.9■■□□□ 1.58
SCAF11Q99590 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC24.9■■□□□ 1.58
SCAF11Q99590 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
SCAF11Q99590 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SCAF11Q99590 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SCAF11Q99590 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
SCAF11Q99590 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SCAF11Q99590 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SCAF11Q99590 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SCAF11Q99590 BICD1-207ENST00000551848 1962 ntBASIC24.9■■□□□ 1.58
SCAF11Q99590 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
SCAF11Q99590 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
SCAF11Q99590 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SCAF11Q99590 KRT18P55-202ENST00000578578 1546 ntBASIC24.9■■□□□ 1.58
SCAF11Q99590 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SCAF11Q99590 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SCAF11Q99590 AC002056.1-201ENST00000395613 760 ntBASIC24.89■■□□□ 1.58
SCAF11Q99590 AL513480.1-201ENST00000451731 511 ntBASIC24.89■■□□□ 1.58
SCAF11Q99590 AC069335.1-201ENST00000489972 472 ntBASIC24.89■■□□□ 1.58
SCAF11Q99590 CECR7-204ENST00000609932 568 ntTSL 2 BASIC24.89■■□□□ 1.58
SCAF11Q99590 STK4-201ENST00000372801 2038 ntTSL 2 BASIC24.89■■□□□ 1.58
SCAF11Q99590 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
SCAF11Q99590 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
SCAF11Q99590 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SCAF11Q99590 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
SCAF11Q99590 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SCAF11Q99590 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
SCAF11Q99590 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
SCAF11Q99590 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
SCAF11Q99590 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
SCAF11Q99590 CYP51A1P2-201ENST00000419457 1499 ntBASIC24.89■■□□□ 1.57
SCAF11Q99590 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC24.89■■□□□ 1.57
SCAF11Q99590 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
SCAF11Q99590 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
SCAF11Q99590 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
SCAF11Q99590 AL590787.1-201ENST00000568856 1315 ntBASIC24.89■■□□□ 1.57
SCAF11Q99590 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.57
SCAF11Q99590 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC24.89■■□□□ 1.57
SCAF11Q99590 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
SCAF11Q99590 WRB-204ENST00000398753 699 ntTSL 3 BASIC24.89■■□□□ 1.57
SCAF11Q99590 ACTG1P4-201ENST00000425123 1122 ntBASIC24.89■■□□□ 1.57
SCAF11Q99590 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC24.89■■□□□ 1.57
SCAF11Q99590 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC24.89■■□□□ 1.57
SCAF11Q99590 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
SCAF11Q99590 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
SCAF11Q99590 AC008761.3-201ENST00000624803 892 ntBASIC24.89■■□□□ 1.57
SCAF11Q99590 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC24.89■■□□□ 1.57
SCAF11Q99590 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SCAF11Q99590 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.88■■□□□ 1.57
SCAF11Q99590 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC24.88■■□□□ 1.57
SCAF11Q99590 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SCAF11Q99590 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC24.88■■□□□ 1.57
SCAF11Q99590 BX276092.7-203ENST00000637198 1536 ntBASIC24.88■■□□□ 1.57
SCAF11Q99590 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SCAF11Q99590 AL020996.1-203ENST00000536896 2307 ntBASIC24.88■■□□□ 1.57
SCAF11Q99590 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC24.88■■□□□ 1.57
SCAF11Q99590 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SCAF11Q99590 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SCAF11Q99590 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC24.88■■□□□ 1.57
SCAF11Q99590 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC24.88■■□□□ 1.57
SCAF11Q99590 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
SCAF11Q99590 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
SCAF11Q99590 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC24.88■■□□□ 1.57
SCAF11Q99590 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC24.88■■□□□ 1.57
SCAF11Q99590 SPDYE11-202ENST00000450699 704 ntBASIC24.88■■□□□ 1.57
SCAF11Q99590 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC24.88■■□□□ 1.57
SCAF11Q99590 SPDYE9P-201ENST00000570642 692 ntBASIC24.88■■□□□ 1.57
SCAF11Q99590 SPDYE10P-202ENST00000612005 668 ntBASIC24.88■■□□□ 1.57
SCAF11Q99590 SPDYE8P-202ENST00000612377 668 ntBASIC24.88■■□□□ 1.57
SCAF11Q99590 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SCAF11Q99590 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC24.88■■□□□ 1.57
SCAF11Q99590 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
SCAF11Q99590 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
SCAF11Q99590 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SCAF11Q99590 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SCAF11Q99590 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC24.87■■□□□ 1.57
SCAF11Q99590 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SCAF11Q99590 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
SCAF11Q99590 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
SCAF11Q99590 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SCAF11Q99590 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SCAF11Q99590 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC24.87■■□□□ 1.57
SCAF11Q99590 MIR943-201ENST00000401286 94 ntBASIC24.87■■□□□ 1.57
SCAF11Q99590 RN7SL589P-201ENST00000481268 310 ntBASIC24.87■■□□□ 1.57
SCAF11Q99590 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC24.87■■□□□ 1.57
SCAF11Q99590 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC24.87■■□□□ 1.57
SCAF11Q99590 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC24.87■■□□□ 1.57
SCAF11Q99590 TSFM-210ENST00000550559 897 ntTSL 5 BASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms