Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.69■□□□□ 0.58
YME1L1Q96TA2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 AC112191.1-201ENST00000523689 701 ntBASIC18.69■□□□□ 0.58
YME1L1Q96TA2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 LINC00628-201ENST00000628516 1289 ntBASIC18.69■□□□□ 0.58
YME1L1Q96TA2 AL121761.2-201ENST00000598007 1648 ntBASIC18.69■□□□□ 0.58
YME1L1Q96TA2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
YME1L1Q96TA2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 AC006116.8-202ENST00000587620 1550 ntBASIC18.68■□□□□ 0.58
YME1L1Q96TA2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 AC092919.2-201ENST00000623631 1645 ntBASIC18.68■□□□□ 0.58
YME1L1Q96TA2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 AC109322.1-201ENST00000524499 1264 ntBASIC18.68■□□□□ 0.58
YME1L1Q96TA2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YME1L1Q96TA2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
YME1L1Q96TA2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.67■□□□□ 0.58
YME1L1Q96TA2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.67■□□□□ 0.58
YME1L1Q96TA2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
YME1L1Q96TA2 ACTG1P4-201ENST00000425123 1122 ntBASIC18.67■□□□□ 0.58
YME1L1Q96TA2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
YME1L1Q96TA2 FAM185BP-201ENST00000443595 716 ntBASIC18.67■□□□□ 0.58
YME1L1Q96TA2 PAWRP1-201ENST00000451083 565 ntBASIC18.67■□□□□ 0.58
YME1L1Q96TA2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.67■□□□□ 0.58
YME1L1Q96TA2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
YME1L1Q96TA2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.67■□□□□ 0.58
YME1L1Q96TA2 AL590787.1-201ENST00000568856 1315 ntBASIC18.67■□□□□ 0.58
YME1L1Q96TA2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YME1L1Q96TA2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YME1L1Q96TA2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
YME1L1Q96TA2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.67■□□□□ 0.58
YME1L1Q96TA2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
YME1L1Q96TA2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 TIMM8BP1-201ENST00000452384 211 ntBASIC18.66■□□□□ 0.58
YME1L1Q96TA2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YME1L1Q96TA2 AC093677.2-201ENST00000600169 1863 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms