Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLCC1Q96S66 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.8□□□□□ -0.04
CLCC1Q96S66 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.8□□□□□ -0.04
CLCC1Q96S66 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 KRT18P23-201ENST00000435622 1283 ntBASIC14.79□□□□□ -0.04
CLCC1Q96S66 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 AC092850.2-201ENST00000623821 2697 ntBASIC14.79□□□□□ -0.04
CLCC1Q96S66 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCC1Q96S66 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLCC1Q96S66 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.78□□□□□ -0.04
CLCC1Q96S66 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.78□□□□□ -0.04
CLCC1Q96S66 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.78□□□□□ -0.04
CLCC1Q96S66 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.78□□□□□ -0.04
CLCC1Q96S66 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 PCDHA1-201ENST00000378133 2726 ntBASIC14.78□□□□□ -0.04
CLCC1Q96S66 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.78□□□□□ -0.04
CLCC1Q96S66 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.78□□□□□ -0.04
CLCC1Q96S66 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.78□□□□□ -0.04
CLCC1Q96S66 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.78□□□□□ -0.04
CLCC1Q96S66 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
CLCC1Q96S66 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.78□□□□□ -0.04
CLCC1Q96S66 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.78□□□□□ -0.04
CLCC1Q96S66 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLCC1Q96S66 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.78□□□□□ -0.04
CLCC1Q96S66 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.78□□□□□ -0.04
CLCC1Q96S66 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCC1Q96S66 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.78□□□□□ -0.04
CLCC1Q96S66 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLCC1Q96S66 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLCC1Q96S66 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.77□□□□□ -0.04
CLCC1Q96S66 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.77□□□□□ -0.04
CLCC1Q96S66 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.77□□□□□ -0.04
CLCC1Q96S66 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLCC1Q96S66 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CLCC1Q96S66 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLCC1Q96S66 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms