Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 DDX39AP1-201ENST00000445147 1181 ntBASIC5.25□□□□□ -1.57
HMCN1Q96RW7 AC055876.2-201ENST00000531834 546 ntBASIC5.25□□□□□ -1.57
HMCN1Q96RW7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 JPT2-203ENST00000382711 894 ntTSL 4 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 AC008267.1-201ENST00000474858 1069 ntBASIC5.25□□□□□ -1.57
HMCN1Q96RW7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 RARRES2P9-201ENST00000565168 469 ntBASIC5.25□□□□□ -1.57
HMCN1Q96RW7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 AC020914.3-201ENST00000594712 304 ntBASIC5.25□□□□□ -1.57
HMCN1Q96RW7 AL049840.4-201ENST00000602422 811 ntBASIC5.25□□□□□ -1.57
HMCN1Q96RW7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC5.25□□□□□ -1.57
HMCN1Q96RW7 AC233280.19-201ENST00000633223 136 ntBASIC5.25□□□□□ -1.57
HMCN1Q96RW7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 NFYC-AS1-201ENST00000606277 1687 ntBASIC5.24□□□□□ -1.57
HMCN1Q96RW7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 AL033527.5-201ENST00000641382 801 ntBASIC5.24□□□□□ -1.57
HMCN1Q96RW7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 BX284668.4-201ENST00000453917 508 ntBASIC5.24□□□□□ -1.57
HMCN1Q96RW7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC5.24□□□□□ -1.57
HMCN1Q96RW7 AC020765.3-201ENST00000613051 740 ntBASIC5.24□□□□□ -1.57
HMCN1Q96RW7 AC007967.4-201ENST00000614700 386 ntBASIC5.24□□□□□ -1.57
HMCN1Q96RW7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 AC097637.2-201ENST00000624096 1997 ntBASIC5.24□□□□□ -1.57
HMCN1Q96RW7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMCN1Q96RW7 RPL37AP1-201ENST00000412502 279 ntBASIC5.24□□□□□ -1.57
HMCN1Q96RW7 BRI3P1-201ENST00000440440 378 ntBASIC5.24□□□□□ -1.57
HMCN1Q96RW7 REEP5-205ENST00000504247 480 ntTSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms