Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 AC003669.1-201ENST00000334569 611 ntBASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 STK19B-204ENST00000512515 211 ntBASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 AP000867.4-201ENST00000641616 219 ntBASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CSPG4P5Q96PW8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CSPG4P5Q96PW8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CSPG4P5Q96PW8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
CSPG4P5Q96PW8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.02■□□□□ 0.47
CSPG4P5Q96PW8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CSPG4P5Q96PW8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.02■□□□□ 0.47
CSPG4P5Q96PW8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CSPG4P5Q96PW8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CSPG4P5Q96PW8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CSPG4P5Q96PW8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CSPG4P5Q96PW8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CSPG4P5Q96PW8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CSPG4P5Q96PW8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 SLC25A1P3-201ENST00000395415 828 ntBASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 KLF4P1-201ENST00000412782 1185 ntBASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 FOSL1P1-201ENST00000511041 816 ntBASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG4P5Q96PW8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CSPG4P5Q96PW8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CSPG4P5Q96PW8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18■□□□□ 0.47
CSPG4P5Q96PW8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18■□□□□ 0.47
CSPG4P5Q96PW8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18■□□□□ 0.47
CSPG4P5Q96PW8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18■□□□□ 0.47
CSPG4P5Q96PW8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18■□□□□ 0.47
CSPG4P5Q96PW8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18■□□□□ 0.47
CSPG4P5Q96PW8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18■□□□□ 0.47
CSPG4P5Q96PW8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18■□□□□ 0.47
CSPG4P5Q96PW8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CSPG4P5Q96PW8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18■□□□□ 0.47
CSPG4P5Q96PW8 KRT16P4-201ENST00000453883 522 ntBASIC18■□□□□ 0.47
CSPG4P5Q96PW8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18■□□□□ 0.47
CSPG4P5Q96PW8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18■□□□□ 0.47
CSPG4P5Q96PW8 MIR3652-201ENST00000579335 131 ntBASIC18■□□□□ 0.47
CSPG4P5Q96PW8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18■□□□□ 0.47
CSPG4P5Q96PW8 AL591684.3-201ENST00000605187 298 ntBASIC18■□□□□ 0.47
CSPG4P5Q96PW8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18■□□□□ 0.47
CSPG4P5Q96PW8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18■□□□□ 0.47
CSPG4P5Q96PW8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms