Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 GPR89P-201ENST00000407924 1495 ntBASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 AC254562.1-201ENST00000417586 456 ntBASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 MKNK2P1-201ENST00000437526 628 ntBASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 STK19B-204ENST00000512515 211 ntBASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 AC018845.2-201ENST00000568326 409 ntBASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SYNGAP1Q96PV0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SYNGAP1Q96PV0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.83■□□□□ 0.76
SYNGAP1Q96PV0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SYNGAP1Q96PV0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SYNGAP1Q96PV0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SYNGAP1Q96PV0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SYNGAP1Q96PV0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.83■□□□□ 0.76
SYNGAP1Q96PV0 AC009949.1-201ENST00000623048 1830 ntBASIC19.83■□□□□ 0.76
SYNGAP1Q96PV0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 AL596442.2-201ENST00000610240 980 ntBASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 AL513190.1-201ENST00000621254 727 ntBASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 NOC2LP1-202ENST00000452600 2235 ntBASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.82■□□□□ 0.76
SYNGAP1Q96PV0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 IGLL3P-201ENST00000412472 434 ntBASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 IGHV3-52-201ENST00000519770 353 ntBASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 AC009336.1-201ENST00000608941 1553 ntBASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms