Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ALPK3Q96L96 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALPK3Q96L96 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALPK3Q96L96 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ALPK3Q96L96 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALPK3Q96L96 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.83■□□□□ 0.61
ALPK3Q96L96 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALPK3Q96L96 AC009477.1-201ENST00000452936 217 ntBASIC18.83■□□□□ 0.6
ALPK3Q96L96 SNX29P1-201ENST00000548357 1007 ntBASIC18.83■□□□□ 0.6
ALPK3Q96L96 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.83■□□□□ 0.6
ALPK3Q96L96 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.83■□□□□ 0.6
ALPK3Q96L96 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.83■□□□□ 0.6
ALPK3Q96L96 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALPK3Q96L96 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ALPK3Q96L96 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALPK3Q96L96 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALPK3Q96L96 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALPK3Q96L96 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.82■□□□□ 0.6
ALPK3Q96L96 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALPK3Q96L96 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALPK3Q96L96 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.82■□□□□ 0.6
ALPK3Q96L96 DGCR5-201ENST00000399539 862 ntBASIC18.82■□□□□ 0.6
ALPK3Q96L96 HMGA1P7-201ENST00000406908 502 ntBASIC18.82■□□□□ 0.6
ALPK3Q96L96 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
ALPK3Q96L96 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.82■□□□□ 0.6
ALPK3Q96L96 TP53TG3HP-202ENST00000569755 579 ntBASIC18.82■□□□□ 0.6
ALPK3Q96L96 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.82■□□□□ 0.6
ALPK3Q96L96 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.82■□□□□ 0.6
ALPK3Q96L96 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALPK3Q96L96 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
ALPK3Q96L96 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALPK3Q96L96 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALPK3Q96L96 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALPK3Q96L96 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALPK3Q96L96 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALPK3Q96L96 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ALPK3Q96L96 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.82■□□□□ 0.6
ALPK3Q96L96 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.82■□□□□ 0.6
ALPK3Q96L96 AC112492.5-201ENST00000421897 457 ntBASIC18.82■□□□□ 0.6
ALPK3Q96L96 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.82■□□□□ 0.6
ALPK3Q96L96 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ALPK3Q96L96 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.82■□□□□ 0.6
ALPK3Q96L96 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALPK3Q96L96 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.82■□□□□ 0.6
ALPK3Q96L96 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.82■□□□□ 0.6
ALPK3Q96L96 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALPK3Q96L96 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALPK3Q96L96 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.82■□□□□ 0.6
ALPK3Q96L96 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.82■□□□□ 0.6
ALPK3Q96L96 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALPK3Q96L96 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALPK3Q96L96 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALPK3Q96L96 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALPK3Q96L96 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALPK3Q96L96 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.81■□□□□ 0.6
ALPK3Q96L96 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.81■□□□□ 0.6
ALPK3Q96L96 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ALPK3Q96L96 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ALPK3Q96L96 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
ALPK3Q96L96 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.81■□□□□ 0.6
ALPK3Q96L96 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.81■□□□□ 0.6
ALPK3Q96L96 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.81■□□□□ 0.6
ALPK3Q96L96 AC008738.7-201ENST00000609744 511 ntBASIC18.81■□□□□ 0.6
ALPK3Q96L96 MIR6805-201ENST00000615055 62 ntBASIC18.81■□□□□ 0.6
ALPK3Q96L96 SPTSSB-204ENST00000617024 1292 ntBASIC18.81■□□□□ 0.6
ALPK3Q96L96 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.81■□□□□ 0.6
ALPK3Q96L96 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALPK3Q96L96 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.81■□□□□ 0.6
ALPK3Q96L96 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALPK3Q96L96 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALPK3Q96L96 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALPK3Q96L96 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALPK3Q96L96 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALPK3Q96L96 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALPK3Q96L96 AC126763.1-201ENST00000552015 2118 ntBASIC18.81■□□□□ 0.6
ALPK3Q96L96 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALPK3Q96L96 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.8■□□□□ 0.6
ALPK3Q96L96 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.8■□□□□ 0.6
ALPK3Q96L96 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.8■□□□□ 0.6
ALPK3Q96L96 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ALPK3Q96L96 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.8■□□□□ 0.6
ALPK3Q96L96 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.8■□□□□ 0.6
ALPK3Q96L96 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ALPK3Q96L96 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALPK3Q96L96 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ALPK3Q96L96 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ALPK3Q96L96 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALPK3Q96L96 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.8■□□□□ 0.6
ALPK3Q96L96 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.8■□□□□ 0.6
ALPK3Q96L96 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
ALPK3Q96L96 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ALPK3Q96L96 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ALPK3Q96L96 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.8■□□□□ 0.6
ALPK3Q96L96 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ALPK3Q96L96 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.8■□□□□ 0.6
ALPK3Q96L96 MIR4515-201ENST00000584082 81 ntBASIC18.8■□□□□ 0.6
ALPK3Q96L96 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.8■□□□□ 0.6
ALPK3Q96L96 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ALPK3Q96L96 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALPK3Q96L96 AC138969.3-201ENST00000546612 1459 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms