Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.84■□□□□ 0.61
SNX27Q96L92 AC007274.1-201ENST00000439805 662 ntBASIC18.84■□□□□ 0.61
SNX27Q96L92 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.84■□□□□ 0.61
SNX27Q96L92 RNA5SP415-201ENST00000517246 115 ntBASIC18.84■□□□□ 0.61
SNX27Q96L92 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.84■□□□□ 0.61
SNX27Q96L92 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SNX27Q96L92 MIR1199-201ENST00000621445 119 ntBASIC18.84■□□□□ 0.61
SNX27Q96L92 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX27Q96L92 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX27Q96L92 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX27Q96L92 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX27Q96L92 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX27Q96L92 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX27Q96L92 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX27Q96L92 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX27Q96L92 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNX27Q96L92 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.84■□□□□ 0.61
SNX27Q96L92 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNX27Q96L92 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.83■□□□□ 0.61
SNX27Q96L92 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.83■□□□□ 0.61
SNX27Q96L92 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNX27Q96L92 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.83■□□□□ 0.61
SNX27Q96L92 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.83■□□□□ 0.61
SNX27Q96L92 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SNX27Q96L92 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.83■□□□□ 0.61
SNX27Q96L92 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.83■□□□□ 0.6
SNX27Q96L92 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.83■□□□□ 0.6
SNX27Q96L92 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.83■□□□□ 0.6
SNX27Q96L92 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX27Q96L92 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.83■□□□□ 0.6
SNX27Q96L92 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.83■□□□□ 0.6
SNX27Q96L92 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.83■□□□□ 0.6
SNX27Q96L92 LINC00982-205ENST00000420957 435 ntBASIC18.83■□□□□ 0.6
SNX27Q96L92 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNX27Q96L92 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.83■□□□□ 0.6
SNX27Q96L92 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.83■□□□□ 0.6
SNX27Q96L92 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.83■□□□□ 0.6
SNX27Q96L92 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX27Q96L92 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.83■□□□□ 0.6
SNX27Q96L92 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX27Q96L92 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SNX27Q96L92 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.83■□□□□ 0.6
SNX27Q96L92 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.83■□□□□ 0.6
SNX27Q96L92 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNX27Q96L92 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SNX27Q96L92 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SNX27Q96L92 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX27Q96L92 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SNX27Q96L92 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX27Q96L92 AC133963.1-201ENST00000504166 1679 ntBASIC18.82■□□□□ 0.6
SNX27Q96L92 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SNX27Q96L92 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX27Q96L92 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.82■□□□□ 0.6
SNX27Q96L92 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.82■□□□□ 0.6
SNX27Q96L92 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SNX27Q96L92 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX27Q96L92 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX27Q96L92 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX27Q96L92 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX27Q96L92 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.82■□□□□ 0.6
SNX27Q96L92 UNC93B6-202ENST00000528242 690 ntBASIC18.82■□□□□ 0.6
SNX27Q96L92 AC034105.1-201ENST00000563488 319 ntBASIC18.82■□□□□ 0.6
SNX27Q96L92 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.82■□□□□ 0.6
SNX27Q96L92 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.82■□□□□ 0.6
SNX27Q96L92 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX27Q96L92 AL353135.1-201ENST00000606729 504 ntBASIC18.82■□□□□ 0.6
SNX27Q96L92 Z83851.2-201ENST00000609564 659 ntBASIC18.82■□□□□ 0.6
SNX27Q96L92 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX27Q96L92 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX27Q96L92 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SNX27Q96L92 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SNX27Q96L92 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX27Q96L92 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX27Q96L92 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX27Q96L92 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX27Q96L92 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX27Q96L92 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX27Q96L92 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.82■□□□□ 0.6
SNX27Q96L92 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX27Q96L92 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX27Q96L92 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
SNX27Q96L92 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX27Q96L92 ZNF259P1-201ENST00000407656 1365 ntBASIC18.81■□□□□ 0.6
SNX27Q96L92 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX27Q96L92 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX27Q96L92 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SNX27Q96L92 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX27Q96L92 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX27Q96L92 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX27Q96L92 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX27Q96L92 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SNX27Q96L92 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX27Q96L92 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX27Q96L92 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX27Q96L92 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX27Q96L92 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX27Q96L92 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX27Q96L92 AC004967.1-201ENST00000453589 447 ntBASIC18.81■□□□□ 0.6
SNX27Q96L92 AC022494.1-201ENST00000466044 728 ntBASIC18.81■□□□□ 0.6
SNX27Q96L92 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms