Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 DDX43P3-201ENST00000441064 443 ntBASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 AC026366.1-201ENST00000488803 879 ntBASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 SLC25A1P4-201ENST00000567977 778 ntBASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 KRT8P47-201ENST00000604727 1398 ntBASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 AC022188.1-201ENST00000620960 1664 ntBASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.83■□□□□ 0.28
CLPTM1LQ96KA5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 FSCN1P1-201ENST00000568912 1481 ntBASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 SLC25A1P3-201ENST00000395415 828 ntBASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 CR769767.2-201ENST00000622735 460 ntBASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1LQ96KA5 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 AL355802.2-201ENST00000402069 882 ntBASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 AC023824.1-201ENST00000562945 2975 ntBASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms