Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 AC097637.2-201ENST00000624096 1997 ntBASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 AL590627.1-203ENST00000421194 1026 ntBASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 AC120114.3-201ENST00000611923 658 ntBASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 BX640515.1-201ENST00000617215 977 ntBASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 AC068880.1-201ENST00000507289 2297 ntBASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
SMARCD1Q96GM5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 AC116407.3-201ENST00000623905 1129 ntBASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SMARCD1Q96GM5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 IL9RP2-201ENST00000423948 1312 ntBASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 ACTG1P4-201ENST00000425123 1122 ntBASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 KRT18P27-201ENST00000427733 1299 ntBASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 AC092910.1-201ENST00000482027 1129 ntBASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 AL139424.1-201ENST00000607572 797 ntBASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 AC004706.3-202ENST00000621574 984 ntBASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 AL135999.2-201ENST00000622438 1686 ntBASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMARCD1Q96GM5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms