Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.8■□□□□ 0.92
DDX11Q96FC9 HLA-A-201ENST00000376802 1334 ntBASIC20.79■□□□□ 0.92
DDX11Q96FC9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX11Q96FC9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX11Q96FC9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX11Q96FC9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX11Q96FC9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.79■□□□□ 0.92
DDX11Q96FC9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX11Q96FC9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX11Q96FC9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX11Q96FC9 AC080080.1-201ENST00000625121 2420 ntBASIC20.79■□□□□ 0.92
DDX11Q96FC9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.79■□□□□ 0.92
DDX11Q96FC9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX11Q96FC9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX11Q96FC9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX11Q96FC9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX11Q96FC9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX11Q96FC9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX11Q96FC9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX11Q96FC9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX11Q96FC9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX11Q96FC9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX11Q96FC9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 REXO1L11P-201ENST00000620964 1927 ntBASIC20.78■□□□□ 0.92
DDX11Q96FC9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX11Q96FC9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX11Q96FC9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX11Q96FC9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX11Q96FC9 AC112698.1-201ENST00000510299 916 ntBASIC20.78■□□□□ 0.92
DDX11Q96FC9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX11Q96FC9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX11Q96FC9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX11Q96FC9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX11Q96FC9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX11Q96FC9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
DDX11Q96FC9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDX11Q96FC9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX11Q96FC9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDX11Q96FC9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
DDX11Q96FC9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX11Q96FC9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX11Q96FC9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX11Q96FC9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX11Q96FC9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX11Q96FC9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX11Q96FC9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
DDX11Q96FC9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX11Q96FC9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX11Q96FC9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX11Q96FC9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.77■□□□□ 0.92
DDX11Q96FC9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX11Q96FC9 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.77■□□□□ 0.92
DDX11Q96FC9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX11Q96FC9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX11Q96FC9 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX11Q96FC9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.77■□□□□ 0.92
DDX11Q96FC9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDX11Q96FC9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX11Q96FC9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
DDX11Q96FC9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.77■□□□□ 0.92
DDX11Q96FC9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX11Q96FC9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
DDX11Q96FC9 LINC00304-203ENST00000565008 1864 ntBASIC20.77■□□□□ 0.92
DDX11Q96FC9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
DDX11Q96FC9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.77■□□□□ 0.91
DDX11Q96FC9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.77■□□□□ 0.91
DDX11Q96FC9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
DDX11Q96FC9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.77■□□□□ 0.91
DDX11Q96FC9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX11Q96FC9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX11Q96FC9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX11Q96FC9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX11Q96FC9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX11Q96FC9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX11Q96FC9 FAM197Y8-203ENST00000450145 560 ntBASIC20.76■□□□□ 0.91
DDX11Q96FC9 AC068472.1-201ENST00000474589 881 ntBASIC20.76■□□□□ 0.91
DDX11Q96FC9 AC114341.1-201ENST00000618070 349 ntBASIC20.76■□□□□ 0.91
DDX11Q96FC9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms