Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE4Q96A23 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE4Q96A23 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE4Q96A23 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE4Q96A23 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE4Q96A23 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE4Q96A23 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE4Q96A23 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE4Q96A23 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE4Q96A23 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE4Q96A23 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 MTDHP3-201ENST00000594186 672 ntBASIC15.73■□□□□ 0.11
CPNE4Q96A23 AL121912.1-201ENST00000603683 238 ntBASIC15.73■□□□□ 0.11
CPNE4Q96A23 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 AC073592.5-201ENST00000624854 528 ntBASIC15.73■□□□□ 0.11
CPNE4Q96A23 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE4Q96A23 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE4Q96A23 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE4Q96A23 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.73■□□□□ 0.11
CPNE4Q96A23 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE4Q96A23 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE4Q96A23 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE4Q96A23 GNAS-203ENST00000306120 1878 ntBASIC15.72■□□□□ 0.11
CPNE4Q96A23 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE4Q96A23 KRT8P10-201ENST00000450021 1447 ntBASIC15.72■□□□□ 0.11
CPNE4Q96A23 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE4Q96A23 AC003669.1-201ENST00000334569 611 ntBASIC15.72■□□□□ 0.11
CPNE4Q96A23 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE4Q96A23 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE4Q96A23 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE4Q96A23 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 AF238378.1-201ENST00000526806 358 ntBASIC15.72■□□□□ 0.11
CPNE4Q96A23 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 AL139288.1-201ENST00000623748 933 ntBASIC15.72■□□□□ 0.11
CPNE4Q96A23 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE4Q96A23 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE4Q96A23 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.72■□□□□ 0.11
CPNE4Q96A23 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE4Q96A23 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE4Q96A23 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.72■□□□□ 0.11
CPNE4Q96A23 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 REXO1L11P-201ENST00000620964 1927 ntBASIC15.72■□□□□ 0.11
CPNE4Q96A23 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CPNE4Q96A23 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE4Q96A23 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE4Q96A23 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE4Q96A23 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE4Q96A23 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE4Q96A23 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE4Q96A23 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE4Q96A23 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE4Q96A23 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE4Q96A23 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE4Q96A23 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE4Q96A23 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE4Q96A23 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms