Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TNFRSF25Q93038 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF25Q93038 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.81■□□□□ 0.76
TNFRSF25Q93038 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF25Q93038 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.81■□□□□ 0.76
TNFRSF25Q93038 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF25Q93038 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
TNFRSF25Q93038 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF25Q93038 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF25Q93038 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 FZD10-202ENST00000539839 3282 ntBASIC19.8■□□□□ 0.76
TNFRSF25Q93038 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 EGFEM1P-202ENST00000431685 1563 ntBASIC19.8■□□□□ 0.76
TNFRSF25Q93038 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 AC012313.1-201ENST00000593393 3059 ntBASIC19.8■□□□□ 0.76
TNFRSF25Q93038 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 AC092053.1-201ENST00000605787 1936 ntBASIC19.8■□□□□ 0.76
TNFRSF25Q93038 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF25Q93038 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 EMBP1-201ENST00000458200 901 ntBASIC19.79■□□□□ 0.76
TNFRSF25Q93038 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 AL691432.3-201ENST00000621860 400 ntBASIC19.79■□□□□ 0.76
TNFRSF25Q93038 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF25Q93038 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 AC022211.2-201ENST00000585075 2527 ntBASIC19.78■□□□□ 0.76
TNFRSF25Q93038 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 AC097637.2-201ENST00000624096 1997 ntBASIC19.78■□□□□ 0.76
TNFRSF25Q93038 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 LINC00982-205ENST00000420957 435 ntBASIC19.78■□□□□ 0.76
TNFRSF25Q93038 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 AL022326.1-202ENST00000641533 845 ntBASIC19.78■□□□□ 0.76
TNFRSF25Q93038 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 AC060834.1-201ENST00000443027 2032 ntBASIC19.78■□□□□ 0.76
TNFRSF25Q93038 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF25Q93038 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TNFRSF25Q93038 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.77■□□□□ 0.76
TNFRSF25Q93038 LTB4R2-202ENST00000528054 3092 ntBASIC19.77■□□□□ 0.76
TNFRSF25Q93038 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFRSF25Q93038 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TNFRSF25Q93038 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms