Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.61■□□□□ 0.57
DDX1Q92499 AC132938.5-201ENST00000624980 1813 ntBASIC18.6■□□□□ 0.57
DDX1Q92499 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX1Q92499 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DDX1Q92499 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.6■□□□□ 0.57
DDX1Q92499 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
DDX1Q92499 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
DDX1Q92499 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX1Q92499 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
DDX1Q92499 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.6■□□□□ 0.57
DDX1Q92499 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.6■□□□□ 0.57
DDX1Q92499 AL671883.3-201ENST00000603274 991 ntBASIC18.6■□□□□ 0.57
DDX1Q92499 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX1Q92499 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 AC046185.3-201ENST00000623228 1824 ntBASIC18.6■□□□□ 0.57
DDX1Q92499 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DDX1Q92499 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX1Q92499 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX1Q92499 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
DDX1Q92499 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 PCDHA12-202ENST00000613593 2588 ntBASIC18.59■□□□□ 0.57
DDX1Q92499 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.59■□□□□ 0.57
DDX1Q92499 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.59■□□□□ 0.57
DDX1Q92499 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.59■□□□□ 0.57
DDX1Q92499 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.59■□□□□ 0.57
DDX1Q92499 AC074051.2-201ENST00000565115 352 ntBASIC18.59■□□□□ 0.57
DDX1Q92499 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX1Q92499 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.59■□□□□ 0.57
DDX1Q92499 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.59■□□□□ 0.57
DDX1Q92499 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
DDX1Q92499 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
DDX1Q92499 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX1Q92499 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX1Q92499 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.58■□□□□ 0.57
DDX1Q92499 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX1Q92499 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX1Q92499 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
DDX1Q92499 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX1Q92499 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
DDX1Q92499 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX1Q92499 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.58■□□□□ 0.57
DDX1Q92499 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX1Q92499 HLA-A-201ENST00000376802 1334 ntBASIC18.58■□□□□ 0.57
DDX1Q92499 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX1Q92499 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX1Q92499 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX1Q92499 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.58■□□□□ 0.56
DDX1Q92499 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX1Q92499 MINOS1P3-201ENST00000457048 203 ntBASIC18.58■□□□□ 0.56
DDX1Q92499 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.58■□□□□ 0.56
DDX1Q92499 AP000867.3-201ENST00000524675 377 ntBASIC18.58■□□□□ 0.56
DDX1Q92499 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.58■□□□□ 0.56
DDX1Q92499 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.58■□□□□ 0.56
DDX1Q92499 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.58■□□□□ 0.56
DDX1Q92499 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX1Q92499 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
DDX1Q92499 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms