Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 AL512384.1-201ENST00000406683 331 ntBASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 AC142381.1-201ENST00000426099 345 ntBASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 AL161645.1-201ENST00000622716 1255 ntBASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 AC004840.1-201ENST00000636359 365 ntBASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 AC073592.8-201ENST00000624126 511 ntBASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
ALMS1Q8TCU4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 SPDYE18-201ENST00000510091 1050 ntBASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 IGHV3-62-201ENST00000520057 340 ntBASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 MIR4453-201ENST00000584019 89 ntBASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 SNX29P1-201ENST00000548357 1007 ntBASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 AC241585.1-201ENST00000433527 519 ntBASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms