Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 REXO1L6P-202ENST00000619970 1078 ntBASIC18.53■□□□□ 0.56
UBA3Q8TBC4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 AC004817.3-201ENST00000602957 2129 ntBASIC18.52■□□□□ 0.56
UBA3Q8TBC4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 MYCLP1-201ENST00000372451 1075 ntBASIC18.52■□□□□ 0.56
UBA3Q8TBC4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 STK19B-204ENST00000512515 211 ntBASIC18.52■□□□□ 0.56
UBA3Q8TBC4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 RN7SL510P-201ENST00000581311 263 ntBASIC18.52■□□□□ 0.56
UBA3Q8TBC4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 AC141586.5-201ENST00000624546 2050 ntBASIC18.52■□□□□ 0.56
UBA3Q8TBC4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBA3Q8TBC4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBA3Q8TBC4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBA3Q8TBC4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBA3Q8TBC4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
UBA3Q8TBC4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBA3Q8TBC4 OR6D1P-202ENST00000641007 5290 ntBASIC18.51■□□□□ 0.55
UBA3Q8TBC4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 KLF4P1-201ENST00000412782 1185 ntBASIC18.51■□□□□ 0.55
UBA3Q8TBC4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 AC106795.1-205ENST00000512851 1056 ntBASIC18.51■□□□□ 0.55
UBA3Q8TBC4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 AC008608.2-201ENST00000606089 416 ntBASIC18.51■□□□□ 0.55
UBA3Q8TBC4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBA3Q8TBC4 AC139713.2-201ENST00000641328 2723 ntBASIC18.51■□□□□ 0.55
UBA3Q8TBC4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 AC148477.5-201ENST00000625164 1645 ntBASIC18.5■□□□□ 0.55
UBA3Q8TBC4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 SAPCD2P3-201ENST00000455031 850 ntBASIC18.5■□□□□ 0.55
UBA3Q8TBC4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms