Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF439Q8NDP4 AL121956.5-201ENST00000625261 221 ntBASIC14.53□□□□□ -0.08
ZNF439Q8NDP4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF439Q8NDP4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
ZNF439Q8NDP4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF439Q8NDP4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF439Q8NDP4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
ZNF439Q8NDP4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF439Q8NDP4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF439Q8NDP4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF439Q8NDP4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF439Q8NDP4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF439Q8NDP4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
ZNF439Q8NDP4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF439Q8NDP4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF439Q8NDP4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF439Q8NDP4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF439Q8NDP4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF439Q8NDP4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF439Q8NDP4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF439Q8NDP4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF439Q8NDP4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF439Q8NDP4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF439Q8NDP4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF439Q8NDP4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF439Q8NDP4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
ZNF439Q8NDP4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF439Q8NDP4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF439Q8NDP4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
ZNF439Q8NDP4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 TSPY22P-201ENST00000427496 604 ntBASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 AC005104.2-201ENST00000427818 678 ntBASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 AL049597.2-201ENST00000565575 961 ntBASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 AC011498.5-201ENST00000592027 486 ntBASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 AL353801.3-201ENST00000609898 542 ntBASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF439Q8NDP4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 AC099398.1-201ENST00000567919 2776 ntBASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 AL645608.8-201ENST00000606034 2086 ntBASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 AC097374.2-201ENST00000618617 1306 ntBASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 GUSBP12-201ENST00000513727 720 ntBASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF439Q8NDP4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms