Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
CFAP43Q8NDM7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC27.1■■□□□ 1.93
CFAP43Q8NDM7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 LINC00982-205ENST00000420957 435 ntBASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 TERF1P3-201ENST00000505638 1227 ntBASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC27.09■■□□□ 1.93
CFAP43Q8NDM7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 AC087163.2-201ENST00000457299 853 ntBASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 DUX4L27-201ENST00000554796 1261 ntBASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
CFAP43Q8NDM7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
CFAP43Q8NDM7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC27.08■■□□□ 1.92
CFAP43Q8NDM7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
CFAP43Q8NDM7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC27.08■■□□□ 1.92
CFAP43Q8NDM7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
CFAP43Q8NDM7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.92
CFAP43Q8NDM7 CNN2P2-201ENST00000443536 909 ntBASIC27.08■■□□□ 1.92
CFAP43Q8NDM7 CNN2P3-201ENST00000450201 906 ntBASIC27.08■■□□□ 1.92
CFAP43Q8NDM7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC27.08■■□□□ 1.92
CFAP43Q8NDM7 AL136317.3-201ENST00000618497 906 ntBASIC27.08■■□□□ 1.92
CFAP43Q8NDM7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 KRT18P32-201ENST00000424695 1287 ntBASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 UGT1A2P-201ENST00000454886 866 ntBASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 AC112191.1-201ENST00000523689 701 ntBASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 LINC01451-201ENST00000623792 534 ntBASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC27.07■■□□□ 1.92
CFAP43Q8NDM7 AL135999.2-201ENST00000622438 1686 ntBASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 AC097637.2-201ENST00000624096 1997 ntBASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 GK-202ENST00000378941 458 ntTSL 3 BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CFAP43Q8NDM7 AL355306.1-201ENST00000415580 579 ntBASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 CXCL1P1-201ENST00000502804 216 ntBASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms