Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
UBR1Q8IWV7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC24.57■■□□□ 1.52
UBR1Q8IWV7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC24.57■■□□□ 1.52
UBR1Q8IWV7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC24.57■■□□□ 1.52
UBR1Q8IWV7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC24.57■■□□□ 1.52
UBR1Q8IWV7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
UBR1Q8IWV7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC24.57■■□□□ 1.52
UBR1Q8IWV7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC24.57■■□□□ 1.52
UBR1Q8IWV7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC24.57■■□□□ 1.52
UBR1Q8IWV7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.57■■□□□ 1.52
UBR1Q8IWV7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 AC022144.1-201ENST00000602255 1580 ntBASIC24.56■■□□□ 1.52
UBR1Q8IWV7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 U91328.1-201ENST00000437528 223 ntBASIC24.56■■□□□ 1.52
UBR1Q8IWV7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
UBR1Q8IWV7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 PIN1P1-201ENST00000412108 996 ntBASIC24.55■■□□□ 1.52
UBR1Q8IWV7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 AL031055.1-201ENST00000606362 631 ntBASIC24.55■■□□□ 1.52
UBR1Q8IWV7 AC073592.8-201ENST00000624126 511 ntBASIC24.55■■□□□ 1.52
UBR1Q8IWV7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC24.55■■□□□ 1.52
UBR1Q8IWV7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC24.54■■□□□ 1.52
UBR1Q8IWV7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBR1Q8IWV7 AP000997.3-201ENST00000623333 2250 ntBASIC24.54■■□□□ 1.52
UBR1Q8IWV7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBR1Q8IWV7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBR1Q8IWV7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBR1Q8IWV7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC24.54■■□□□ 1.52
UBR1Q8IWV7 AC008267.7-201ENST00000624570 1194 ntBASIC24.54■■□□□ 1.52
UBR1Q8IWV7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC24.54■■□□□ 1.52
UBR1Q8IWV7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBR1Q8IWV7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBR1Q8IWV7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC24.54■■□□□ 1.52
UBR1Q8IWV7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBR1Q8IWV7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBR1Q8IWV7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
UBR1Q8IWV7 RNU1-129P-201ENST00000384064 167 ntBASIC24.53■■□□□ 1.52
UBR1Q8IWV7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC24.53■■□□□ 1.52
UBR1Q8IWV7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC24.53■■□□□ 1.52
UBR1Q8IWV7 U1.21-201ENST00000580816 167 ntBASIC24.53■■□□□ 1.52
UBR1Q8IWV7 AL590560.3-201ENST00000623350 461 ntBASIC24.53■■□□□ 1.52
UBR1Q8IWV7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
UBR1Q8IWV7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
UBR1Q8IWV7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
UBR1Q8IWV7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC24.53■■□□□ 1.52
UBR1Q8IWV7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
UBR1Q8IWV7 AC135776.1-201ENST00000319817 2481 ntBASIC24.53■■□□□ 1.52
UBR1Q8IWV7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
UBR1Q8IWV7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
UBR1Q8IWV7 NME2P1-201ENST00000426182 414 ntBASIC24.52■■□□□ 1.52
UBR1Q8IWV7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC24.52■■□□□ 1.52
UBR1Q8IWV7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC24.52■■□□□ 1.52
UBR1Q8IWV7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
UBR1Q8IWV7 IGHV3-62-201ENST00000520057 340 ntBASIC24.52■■□□□ 1.52
UBR1Q8IWV7 AC027307.3-201ENST00000594262 1100 ntBASIC24.52■■□□□ 1.52
UBR1Q8IWV7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
UBR1Q8IWV7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.52■■□□□ 1.52
UBR1Q8IWV7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
UBR1Q8IWV7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
UBR1Q8IWV7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
UBR1Q8IWV7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.52■■□□□ 1.52
UBR1Q8IWV7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms