Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
CCDC60Q8IWA6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 ACTG1P4-201ENST00000425123 1122 ntBASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 IGHV3-65-201ENST00000523210 341 ntBASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 AL805961.1-202ENST00000641562 540 ntBASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 AC133963.1-201ENST00000504166 1679 ntBASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC60Q8IWA6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 PTCHD3P3-201ENST00000403073 906 ntBASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 AL591424.1-201ENST00000442569 1213 ntBASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 AC008667.4-201ENST00000607370 168 ntBASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC60Q8IWA6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 KRT18P3-201ENST00000451602 1288 ntBASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC60Q8IWA6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 AC018470.1-201ENST00000624790 3129 ntBASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 AL590787.1-201ENST00000568856 1315 ntBASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms