Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF546Q86UE3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
ZNF546Q86UE3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF546Q86UE3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF546Q86UE3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ZNF546Q86UE3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
ZNF546Q86UE3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF546Q86UE3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ZNF546Q86UE3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF546Q86UE3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF546Q86UE3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.59□□□□□ -0.07
ZNF546Q86UE3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.59□□□□□ -0.07
ZNF546Q86UE3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF546Q86UE3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF546Q86UE3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.59□□□□□ -0.07
ZNF546Q86UE3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
ZNF546Q86UE3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ZNF546Q86UE3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
ZNF546Q86UE3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ZNF546Q86UE3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.07
ZNF546Q86UE3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
ZNF546Q86UE3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
ZNF546Q86UE3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ZNF546Q86UE3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ZNF546Q86UE3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 UNC93B4-201ENST00000505679 747 ntBASIC14.58□□□□□ -0.08
ZNF546Q86UE3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 AL138781.1-201ENST00000566567 1274 ntBASIC14.58□□□□□ -0.08
ZNF546Q86UE3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 IKBKGP1-201ENST00000612193 1073 ntBASIC14.58□□□□□ -0.08
ZNF546Q86UE3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.58□□□□□ -0.08
ZNF546Q86UE3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF546Q86UE3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 NCF1B-203ENST00000435988 1254 ntBASIC14.57□□□□□ -0.08
ZNF546Q86UE3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 RNF216P1-203ENST00000404404 2427 ntBASIC14.57□□□□□ -0.08
ZNF546Q86UE3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.57□□□□□ -0.08
ZNF546Q86UE3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms