Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 GCSHP2-201ENST00000560971 527 ntBASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 AC139887.4-201ENST00000607877 719 ntBASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 AP001094.4-201ENST00000579008 2176 ntBASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TMEM53Q6P2H8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 PP12613-201ENST00000424958 2230 ntBASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 AK4P3-201ENST00000418260 669 ntBASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 YBX1P2-201ENST00000489612 999 ntBASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 MIR3917-201ENST00000580971 93 ntBASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM53Q6P2H8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.08■□□□□ 0.17
TMEM53Q6P2H8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.08■□□□□ 0.17
TMEM53Q6P2H8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TMEM53Q6P2H8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 RNF152P1-201ENST00000397754 604 ntBASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 AC092647.4-201ENST00000457211 535 ntBASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms