Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 AC020916.1-201ENST00000587762 1774 ntBASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 TOB2P1-201ENST00000469761 992 ntBASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HIST2H2AA3Q6FI13 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 LINC00265-3P-201ENST00000447588 903 ntBASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 TPSP2-201ENST00000561760 610 ntBASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 AC109462.3-201ENST00000573934 613 ntBASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 AL139327.4-201ENST00000612362 153 ntBASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 AC016396.2-201ENST00000562575 1417 ntBASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 AC141586.5-201ENST00000624546 2050 ntBASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H2AA3Q6FI13 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms