Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 AC129492.6-201ENST00000611383 1305 ntBASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 PMS2P4-201ENST00000412466 1052 ntBASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 AL671277.1-201ENST00000429656 993 ntBASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 SPDYE11-202ENST00000450699 704 ntBASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 AC069262.1-201ENST00000539058 672 ntBASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 SPDYE9P-201ENST00000570642 692 ntBASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 SPDYE10P-202ENST00000612005 668 ntBASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 SPDYE8P-202ENST00000612377 668 ntBASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 Z92544.3-201ENST00000624747 417 ntBASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 CNN2P2-201ENST00000443536 909 ntBASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 CNN2P3-201ENST00000450201 906 ntBASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 AC093214.1-201ENST00000511688 1107 ntBASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 AC093520.2-201ENST00000561830 333 ntBASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 AL136317.3-201ENST00000618497 906 ntBASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 AJ011932.1-201ENST00000621707 465 ntBASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 AL020996.1-203ENST00000536896 2307 ntBASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 AC135776.1-201ENST00000319817 2481 ntBASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD4Q5XG99 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 AC046185.3-201ENST00000623228 1824 ntBASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms