Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FREM1Q5H8C1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.35■□□□□ 0.05
FREM1Q5H8C1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FREM1Q5H8C1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.35■□□□□ 0.05
FREM1Q5H8C1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.35■□□□□ 0.05
FREM1Q5H8C1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
FREM1Q5H8C1 AL020989.1-201ENST00000422979 469 ntBASIC15.35■□□□□ 0.05
FREM1Q5H8C1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.35■□□□□ 0.05
FREM1Q5H8C1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.35■□□□□ 0.05
FREM1Q5H8C1 AC079776.4-201ENST00000511039 504 ntBASIC15.35■□□□□ 0.05
FREM1Q5H8C1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FREM1Q5H8C1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FREM1Q5H8C1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FREM1Q5H8C1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.35■□□□□ 0.05
FREM1Q5H8C1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.35■□□□□ 0.05
FREM1Q5H8C1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.35■□□□□ 0.05
FREM1Q5H8C1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 AC098831.1-202ENST00000438821 336 ntBASIC15.34■□□□□ 0.05
FREM1Q5H8C1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 AC136632.2-201ENST00000512891 861 ntBASIC15.34■□□□□ 0.05
FREM1Q5H8C1 AC034105.1-201ENST00000563488 319 ntBASIC15.34■□□□□ 0.05
FREM1Q5H8C1 MIR1199-201ENST00000621445 119 ntBASIC15.34■□□□□ 0.05
FREM1Q5H8C1 AL022326.1-202ENST00000641533 845 ntBASIC15.34■□□□□ 0.05
FREM1Q5H8C1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 AC012313.1-201ENST00000593393 3059 ntBASIC15.34■□□□□ 0.05
FREM1Q5H8C1 AC097637.2-201ENST00000624096 1997 ntBASIC15.34■□□□□ 0.05
FREM1Q5H8C1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.34■□□□□ 0.05
FREM1Q5H8C1 AC116407.3-201ENST00000623905 1129 ntBASIC15.34■□□□□ 0.05
FREM1Q5H8C1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.33■□□□□ 0.05
FREM1Q5H8C1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
FREM1Q5H8C1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.33■□□□□ 0.05
FREM1Q5H8C1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
FREM1Q5H8C1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.33■□□□□ 0.05
FREM1Q5H8C1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
FREM1Q5H8C1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.33■□□□□ 0.05
FREM1Q5H8C1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.33■□□□□ 0.05
FREM1Q5H8C1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 ELK2BP-201ENST00000415014 1224 ntBASIC15.33■□□□□ 0.04
FREM1Q5H8C1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
FREM1Q5H8C1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 SPDYE21P-201ENST00000413323 827 ntBASIC15.32■□□□□ 0.04
FREM1Q5H8C1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 SIGLEC30P-201ENST00000455569 941 ntBASIC15.32■□□□□ 0.04
FREM1Q5H8C1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 AC006557.2-201ENST00000592985 1240 ntBASIC15.32■□□□□ 0.04
FREM1Q5H8C1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 AL138688.1-201ENST00000624851 1594 ntBASIC15.32■□□□□ 0.04
FREM1Q5H8C1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms