Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.45■□□□□ 0.7
ECM1Q16610 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECM1Q16610 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECM1Q16610 AC116353.5-201ENST00000638148 1699 ntBASIC19.45■□□□□ 0.7
ECM1Q16610 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
ECM1Q16610 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ECM1Q16610 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.45■□□□□ 0.7
ECM1Q16610 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
ECM1Q16610 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ECM1Q16610 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECM1Q16610 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ECM1Q16610 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECM1Q16610 AL023806.1-201ENST00000603994 1649 ntBASIC19.44■□□□□ 0.7
ECM1Q16610 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ECM1Q16610 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECM1Q16610 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECM1Q16610 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ECM1Q16610 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECM1Q16610 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECM1Q16610 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECM1Q16610 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ECM1Q16610 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.44■□□□□ 0.7
ECM1Q16610 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ECM1Q16610 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ECM1Q16610 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ECM1Q16610 PRYP5-201ENST00000451909 266 ntBASIC19.44■□□□□ 0.7
ECM1Q16610 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.44■□□□□ 0.7
ECM1Q16610 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.44■□□□□ 0.7
ECM1Q16610 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECM1Q16610 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ECM1Q16610 AC025062.2-201ENST00000605477 670 ntBASIC19.44■□□□□ 0.7
ECM1Q16610 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ECM1Q16610 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.44■□□□□ 0.7
ECM1Q16610 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ECM1Q16610 AC080080.1-201ENST00000625121 2420 ntBASIC19.44■□□□□ 0.7
ECM1Q16610 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECM1Q16610 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.44■□□□□ 0.7
ECM1Q16610 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECM1Q16610 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECM1Q16610 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ECM1Q16610 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.43■□□□□ 0.7
ECM1Q16610 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ECM1Q16610 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ECM1Q16610 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECM1Q16610 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ECM1Q16610 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECM1Q16610 AC016396.2-201ENST00000562575 1417 ntBASIC19.43■□□□□ 0.7
ECM1Q16610 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
ECM1Q16610 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.43■□□□□ 0.7
ECM1Q16610 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.43■□□□□ 0.7
ECM1Q16610 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ECM1Q16610 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECM1Q16610 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ECM1Q16610 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECM1Q16610 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECM1Q16610 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.43■□□□□ 0.7
ECM1Q16610 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ECM1Q16610 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ECM1Q16610 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.43■□□□□ 0.7
ECM1Q16610 SIGLEC30P-201ENST00000455569 941 ntBASIC19.43■□□□□ 0.7
ECM1Q16610 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECM1Q16610 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.43■□□□□ 0.7
ECM1Q16610 AL139288.1-201ENST00000623748 933 ntBASIC19.43■□□□□ 0.7
ECM1Q16610 AC148477.8-201ENST00000624298 468 ntBASIC19.43■□□□□ 0.7
ECM1Q16610 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECM1Q16610 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.43■□□□□ 0.7
ECM1Q16610 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECM1Q16610 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ECM1Q16610 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECM1Q16610 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ECM1Q16610 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECM1Q16610 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
ECM1Q16610 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECM1Q16610 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECM1Q16610 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECM1Q16610 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ECM1Q16610 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECM1Q16610 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ECM1Q16610 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ECM1Q16610 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.42■□□□□ 0.7
ECM1Q16610 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ECM1Q16610 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.42■□□□□ 0.7
ECM1Q16610 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ECM1Q16610 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ECM1Q16610 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ECM1Q16610 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ECM1Q16610 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.42■□□□□ 0.7
ECM1Q16610 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.42■□□□□ 0.7
ECM1Q16610 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.42■□□□□ 0.7
ECM1Q16610 HNRNPDP1-201ENST00000439535 754 ntBASIC19.42■□□□□ 0.7
ECM1Q16610 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.42■□□□□ 0.7
ECM1Q16610 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
ECM1Q16610 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
ECM1Q16610 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.42■□□□□ 0.7
ECM1Q16610 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ECM1Q16610 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.42■□□□□ 0.7
ECM1Q16610 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ECM1Q16610 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ECM1Q16610 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ECM1Q16610 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms