Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.44□□□□□ -0.26
HIST1H1AQ02539 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 SLC25A3P1-201ENST00000443844 931 ntBASIC13.44□□□□□ -0.26
HIST1H1AQ02539 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 DUTP2-201ENST00000519164 463 ntBASIC13.44□□□□□ -0.26
HIST1H1AQ02539 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 AL138688.1-201ENST00000624851 1594 ntBASIC13.44□□□□□ -0.26
HIST1H1AQ02539 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H1AQ02539 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 AC100803.2-201ENST00000562459 1963 ntBASIC13.43□□□□□ -0.26
HIST1H1AQ02539 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H1AQ02539 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms