Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDR2Q01850 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDR2Q01850 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CDR2Q01850 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.65■□□□□ 0.58
CDR2Q01850 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.65■□□□□ 0.58
CDR2Q01850 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 OR6D1P-202ENST00000641007 5290 ntBASIC18.65■□□□□ 0.58
CDR2Q01850 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CDR2Q01850 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDR2Q01850 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.65■□□□□ 0.58
CDR2Q01850 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.65■□□□□ 0.58
CDR2Q01850 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.65■□□□□ 0.58
CDR2Q01850 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.65■□□□□ 0.58
CDR2Q01850 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.65■□□□□ 0.58
CDR2Q01850 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.65■□□□□ 0.58
CDR2Q01850 AC011467.2-201ENST00000598425 242 ntBASIC18.65■□□□□ 0.58
CDR2Q01850 AP000550.4-202ENST00000639755 178 ntBASIC18.65■□□□□ 0.58
CDR2Q01850 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.65■□□□□ 0.58
CDR2Q01850 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.65■□□□□ 0.58
CDR2Q01850 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDR2Q01850 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDR2Q01850 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.65■□□□□ 0.58
CDR2Q01850 KRT8P10-201ENST00000450021 1447 ntBASIC18.65■□□□□ 0.58
CDR2Q01850 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDR2Q01850 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.64■□□□□ 0.58
CDR2Q01850 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDR2Q01850 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
CDR2Q01850 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CDR2Q01850 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.64■□□□□ 0.58
CDR2Q01850 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CDR2Q01850 PKD1P1-201ENST00000458669 6805 ntBASIC18.64■□□□□ 0.57
CDR2Q01850 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.64■□□□□ 0.57
CDR2Q01850 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.64■□□□□ 0.57
CDR2Q01850 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CDR2Q01850 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.64■□□□□ 0.57
CDR2Q01850 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.64■□□□□ 0.57
CDR2Q01850 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CDR2Q01850 AP002414.4-201ENST00000589764 1148 ntBASIC18.64■□□□□ 0.57
CDR2Q01850 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.64■□□□□ 0.57
CDR2Q01850 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDR2Q01850 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.64■□□□□ 0.57
CDR2Q01850 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.64■□□□□ 0.57
CDR2Q01850 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.64■□□□□ 0.57
CDR2Q01850 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDR2Q01850 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.64■□□□□ 0.57
CDR2Q01850 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.64■□□□□ 0.57
CDR2Q01850 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDR2Q01850 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDR2Q01850 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 KRT18P35-201ENST00000510488 1269 ntBASIC18.63■□□□□ 0.57
CDR2Q01850 AC111152.3-201ENST00000569699 673 ntBASIC18.63■□□□□ 0.57
CDR2Q01850 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.63■□□□□ 0.57
CDR2Q01850 Z69720.1-201ENST00000601483 472 ntBASIC18.63■□□□□ 0.57
CDR2Q01850 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms