Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HTRA3P83110 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTRA3P83110 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.04■□□□□ 0.8
HTRA3P83110 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.04■□□□□ 0.8
HTRA3P83110 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTRA3P83110 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTRA3P83110 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HTRA3P83110 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTRA3P83110 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTRA3P83110 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTRA3P83110 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.04■□□□□ 0.8
HTRA3P83110 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.04■□□□□ 0.8
HTRA3P83110 U62317.3-201ENST00000608319 855 ntBASIC20.04■□□□□ 0.8
HTRA3P83110 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.04■□□□□ 0.8
HTRA3P83110 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HTRA3P83110 AL391825.1-201ENST00000457671 1364 ntBASIC20.04■□□□□ 0.8
HTRA3P83110 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTRA3P83110 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
HTRA3P83110 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HTRA3P83110 AC125437.2-201ENST00000625180 2167 ntBASIC20.04■□□□□ 0.8
HTRA3P83110 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.04■□□□□ 0.8
HTRA3P83110 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTRA3P83110 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.03■□□□□ 0.8
HTRA3P83110 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.03■□□□□ 0.8
HTRA3P83110 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HTRA3P83110 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTRA3P83110 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.03■□□□□ 0.8
HTRA3P83110 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HTRA3P83110 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTRA3P83110 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC20.03■□□□□ 0.8
HTRA3P83110 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HTRA3P83110 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.03■□□□□ 0.8
HTRA3P83110 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.03■□□□□ 0.8
HTRA3P83110 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.03■□□□□ 0.8
HTRA3P83110 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HTRA3P83110 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HTRA3P83110 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC20.03■□□□□ 0.8
HTRA3P83110 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.03■□□□□ 0.8
HTRA3P83110 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HTRA3P83110 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.03■□□□□ 0.8
HTRA3P83110 COG4-212ENST00000564653 590 ntTSL 5 BASIC20.03■□□□□ 0.8
HTRA3P83110 NAT9-224ENST00000583757 583 ntTSL 3 BASIC20.03■□□□□ 0.8
HTRA3P83110 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.03■□□□□ 0.8
HTRA3P83110 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.03■□□□□ 0.8
HTRA3P83110 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTRA3P83110 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.03■□□□□ 0.8
HTRA3P83110 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTRA3P83110 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.03■□□□□ 0.8
HTRA3P83110 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.03■□□□□ 0.8
HTRA3P83110 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HTRA3P83110 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.02■□□□□ 0.8
HTRA3P83110 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTRA3P83110 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.02■□□□□ 0.8
HTRA3P83110 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HTRA3P83110 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTRA3P83110 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTRA3P83110 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HTRA3P83110 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
HTRA3P83110 AC007375.3-201ENST00000600936 2314 ntBASIC20.02■□□□□ 0.8
HTRA3P83110 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HTRA3P83110 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTRA3P83110 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.02■□□□□ 0.8
HTRA3P83110 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTRA3P83110 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC20.02■□□□□ 0.8
HTRA3P83110 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.02■□□□□ 0.8
HTRA3P83110 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.02■□□□□ 0.8
HTRA3P83110 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.02■□□□□ 0.8
HTRA3P83110 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HTRA3P83110 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTRA3P83110 AC005229.1-201ENST00000392885 409 ntBASIC20.02■□□□□ 0.8
HTRA3P83110 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HTRA3P83110 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.02■□□□□ 0.8
HTRA3P83110 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HTRA3P83110 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.02■□□□□ 0.8
HTRA3P83110 AL138918.1-201ENST00000568306 659 ntBASIC20.02■□□□□ 0.8
HTRA3P83110 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HTRA3P83110 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HTRA3P83110 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.02■□□□□ 0.8
HTRA3P83110 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
HTRA3P83110 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HTRA3P83110 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HTRA3P83110 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HTRA3P83110 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
HTRA3P83110 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTRA3P83110 CLDN5-201ENST00000403084 2357 ntBASIC20.01■□□□□ 0.79
HTRA3P83110 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HTRA3P83110 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
HTRA3P83110 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTRA3P83110 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HTRA3P83110 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.01■□□□□ 0.79
HTRA3P83110 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.01■□□□□ 0.79
HTRA3P83110 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HTRA3P83110 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTRA3P83110 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.01■□□□□ 0.79
HTRA3P83110 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.01■□□□□ 0.79
HTRA3P83110 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC20.01■□□□□ 0.79
HTRA3P83110 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.01■□□□□ 0.79
HTRA3P83110 CTBP2P3-201ENST00000585629 1255 ntBASIC20.01■□□□□ 0.79
HTRA3P83110 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.01■□□□□ 0.79
HTRA3P83110 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms