Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.61■□□□□ 0.41
AP1S1P61966 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S1P61966 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S1P61966 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
AP1S1P61966 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S1P61966 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.61■□□□□ 0.41
AP1S1P61966 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S1P61966 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP1S1P61966 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP1S1P61966 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP1S1P61966 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP1S1P61966 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP1S1P61966 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
AP1S1P61966 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP1S1P61966 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.6■□□□□ 0.41
AP1S1P61966 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP1S1P61966 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.6■□□□□ 0.41
AP1S1P61966 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.6■□□□□ 0.41
AP1S1P61966 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.6■□□□□ 0.41
AP1S1P61966 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.6■□□□□ 0.41
AP1S1P61966 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
AP1S1P61966 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
AP1S1P61966 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
AP1S1P61966 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP1S1P61966 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.6■□□□□ 0.41
AP1S1P61966 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
AP1S1P61966 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP1S1P61966 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
AP1S1P61966 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP1S1P61966 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
AP1S1P61966 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP1S1P61966 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP1S1P61966 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.6■□□□□ 0.41
AP1S1P61966 LINC00896-202ENST00000609602 2128 ntBASIC17.6■□□□□ 0.41
AP1S1P61966 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
AP1S1P61966 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
AP1S1P61966 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP1S1P61966 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.59■□□□□ 0.41
AP1S1P61966 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.59■□□□□ 0.41
AP1S1P61966 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
AP1S1P61966 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP1S1P61966 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.59■□□□□ 0.41
AP1S1P61966 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP1S1P61966 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP1S1P61966 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP1S1P61966 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP1S1P61966 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
AP1S1P61966 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.59■□□□□ 0.41
AP1S1P61966 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP1S1P61966 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.59■□□□□ 0.41
AP1S1P61966 AC018712.1-201ENST00000455767 687 ntBASIC17.59■□□□□ 0.41
AP1S1P61966 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.59■□□□□ 0.41
AP1S1P61966 RNPS1P1-201ENST00000507437 918 ntBASIC17.59■□□□□ 0.41
AP1S1P61966 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.59■□□□□ 0.41
AP1S1P61966 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.59■□□□□ 0.41
AP1S1P61966 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.59■□□□□ 0.41
AP1S1P61966 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
AP1S1P61966 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.59■□□□□ 0.41
AP1S1P61966 AC025062.2-201ENST00000605477 670 ntBASIC17.59■□□□□ 0.41
AP1S1P61966 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP1S1P61966 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP1S1P61966 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
AP1S1P61966 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.59■□□□□ 0.41
AP1S1P61966 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP1S1P61966 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP1S1P61966 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.59■□□□□ 0.41
AP1S1P61966 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.58■□□□□ 0.41
AP1S1P61966 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP1S1P61966 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP1S1P61966 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
AP1S1P61966 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.58■□□□□ 0.41
AP1S1P61966 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.58■□□□□ 0.4
AP1S1P61966 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP1S1P61966 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
AP1S1P61966 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.58■□□□□ 0.4
AP1S1P61966 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.58■□□□□ 0.4
AP1S1P61966 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.58■□□□□ 0.4
AP1S1P61966 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.58■□□□□ 0.4
AP1S1P61966 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP1S1P61966 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
AP1S1P61966 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.58■□□□□ 0.4
AP1S1P61966 AL662844.1-201ENST00000546340 181 ntBASIC17.58■□□□□ 0.4
AP1S1P61966 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.58■□□□□ 0.4
AP1S1P61966 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.58■□□□□ 0.4
AP1S1P61966 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.58■□□□□ 0.4
AP1S1P61966 AC004817.3-201ENST00000602957 2129 ntBASIC17.58■□□□□ 0.4
AP1S1P61966 AL589182.2-201ENST00000619332 1049 ntBASIC17.58■□□□□ 0.4
AP1S1P61966 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
AP1S1P61966 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP1S1P61966 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP1S1P61966 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP1S1P61966 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.58■□□□□ 0.4
AP1S1P61966 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
AP1S1P61966 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP1S1P61966 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP1S1P61966 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
AP1S1P61966 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP1S1P61966 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms