Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CHKAP35790 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 KRT8P10-201ENST00000450021 1447 ntBASIC18.49■□□□□ 0.55
CHKAP35790 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.48■□□□□ 0.55
CHKAP35790 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.48■□□□□ 0.55
CHKAP35790 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CHKAP35790 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CHKAP35790 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.48■□□□□ 0.55
CHKAP35790 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 DUTP2-201ENST00000519164 463 ntBASIC18.48■□□□□ 0.55
CHKAP35790 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.48■□□□□ 0.55
CHKAP35790 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.48■□□□□ 0.55
CHKAP35790 AC011467.2-201ENST00000598425 242 ntBASIC18.48■□□□□ 0.55
CHKAP35790 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.48■□□□□ 0.55
CHKAP35790 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.48■□□□□ 0.55
CHKAP35790 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CHKAP35790 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CHKAP35790 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.48■□□□□ 0.55
CHKAP35790 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
CHKAP35790 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.48■□□□□ 0.55
CHKAP35790 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.48■□□□□ 0.55
CHKAP35790 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CHKAP35790 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHKAP35790 AC097374.2-201ENST00000618617 1306 ntBASIC18.48■□□□□ 0.55
CHKAP35790 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.48■□□□□ 0.55
CHKAP35790 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CHKAP35790 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CHKAP35790 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHKAP35790 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHKAP35790 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHKAP35790 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHKAP35790 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHKAP35790 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
CHKAP35790 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHKAP35790 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.47■□□□□ 0.55
CHKAP35790 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHKAP35790 AC104692.2-201ENST00000603054 253 ntBASIC18.47■□□□□ 0.55
CHKAP35790 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHKAP35790 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHKAP35790 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHKAP35790 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHKAP35790 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHKAP35790 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
CHKAP35790 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.46■□□□□ 0.55
CHKAP35790 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.46■□□□□ 0.55
CHKAP35790 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.46■□□□□ 0.55
CHKAP35790 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CHKAP35790 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.46■□□□□ 0.55
CHKAP35790 AKR1C7P-201ENST00000305623 895 ntBASIC18.46■□□□□ 0.55
CHKAP35790 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CHKAP35790 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.46■□□□□ 0.55
CHKAP35790 AC079781.3-201ENST00000449110 356 ntBASIC18.46■□□□□ 0.55
CHKAP35790 FDX1P1-201ENST00000449115 551 ntBASIC18.46■□□□□ 0.55
CHKAP35790 AC132008.2-207ENST00000454517 770 ntBASIC18.46■□□□□ 0.55
CHKAP35790 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.46■□□□□ 0.55
CHKAP35790 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.46■□□□□ 0.55
CHKAP35790 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.46■□□□□ 0.55
CHKAP35790 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.46■□□□□ 0.55
CHKAP35790 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 INTS4P1-201ENST00000438455 1935 ntBASIC18.46■□□□□ 0.55
CHKAP35790 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.46■□□□□ 0.55
CHKAP35790 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 AC124067.4-201ENST00000519691 2379 ntBASIC18.46■□□□□ 0.55
CHKAP35790 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHKAP35790 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHKAP35790 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms