Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 AC016396.2-201ENST00000562575 1417 ntBASIC17.67■□□□□ 0.42
HLA-DPA1P20036 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 AD001527.2-201ENST00000622994 785 ntBASIC17.67■□□□□ 0.42
HLA-DPA1P20036 AL023806.1-201ENST00000603994 1649 ntBASIC17.67■□□□□ 0.42
HLA-DPA1P20036 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DPA1P20036 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 STK25P1-201ENST00000585406 838 ntBASIC17.66■□□□□ 0.42
HLA-DPA1P20036 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 AC141586.5-201ENST00000624546 2050 ntBASIC17.66■□□□□ 0.42
HLA-DPA1P20036 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HLA-DPA1P20036 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 CROCCP2-202ENST00000412962 2773 ntBASIC17.65■□□□□ 0.42
HLA-DPA1P20036 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms