Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CHRNB1P11230 AC073592.3-201ENST00000625118 1834 ntBASIC17.68■□□□□ 0.42
CHRNB1P11230 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHRNB1P11230 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CHRNB1P11230 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNB1P11230 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CHRNB1P11230 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB1P11230 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CHRNB1P11230 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB1P11230 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB1P11230 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNB1P11230 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNB1P11230 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.67■□□□□ 0.42
CHRNB1P11230 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB1P11230 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB1P11230 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB1P11230 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHRNB1P11230 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB1P11230 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNB1P11230 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB1P11230 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB1P11230 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNB1P11230 HLA-J-203ENST00000494367 1087 ntBASIC17.67■□□□□ 0.42
CHRNB1P11230 IGHV3-52-201ENST00000519770 353 ntBASIC17.67■□□□□ 0.42
CHRNB1P11230 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNB1P11230 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.67■□□□□ 0.42
CHRNB1P11230 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNB1P11230 AC093512.1-201ENST00000617969 520 ntBASIC17.67■□□□□ 0.42
CHRNB1P11230 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNB1P11230 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNB1P11230 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB1P11230 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB1P11230 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CHRNB1P11230 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNB1P11230 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB1P11230 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB1P11230 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB1P11230 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB1P11230 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNB1P11230 BX276092.7-203ENST00000637198 1536 ntBASIC17.67■□□□□ 0.42
CHRNB1P11230 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB1P11230 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CHRNB1P11230 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNB1P11230 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRNB1P11230 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRNB1P11230 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNB1P11230 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CHRNB1P11230 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNB1P11230 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRNB1P11230 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.66■□□□□ 0.42
CHRNB1P11230 CXCL1P1-201ENST00000502804 216 ntBASIC17.66■□□□□ 0.42
CHRNB1P11230 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRNB1P11230 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRNB1P11230 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRNB1P11230 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRNB1P11230 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNB1P11230 AC116407.2-201ENST00000613639 860 ntBASIC17.66■□□□□ 0.42
CHRNB1P11230 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CHRNB1P11230 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHRNB1P11230 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRNB1P11230 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CHRNB1P11230 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNB1P11230 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNB1P11230 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHRNB1P11230 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNB1P11230 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHRNB1P11230 AC093503.3-201ENST00000624917 2352 ntBASIC17.66■□□□□ 0.42
CHRNB1P11230 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB1P11230 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB1P11230 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB1P11230 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB1P11230 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB1P11230 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB1P11230 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB1P11230 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB1P11230 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.65■□□□□ 0.42
CHRNB1P11230 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.65■□□□□ 0.42
CHRNB1P11230 COX20P2-201ENST00000452636 358 ntBASIC17.65■□□□□ 0.42
CHRNB1P11230 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.65■□□□□ 0.42
CHRNB1P11230 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms