Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC6P09630 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC6P09630 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXC6P09630 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXC6P09630 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXC6P09630 AC112191.1-201ENST00000523689 701 ntBASIC19.65■□□□□ 0.74
HOXC6P09630 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
HOXC6P09630 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC6P09630 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.65■□□□□ 0.74
HOXC6P09630 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXC6P09630 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
HOXC6P09630 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC6P09630 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXC6P09630 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC6P09630 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC6P09630 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC6P09630 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC6P09630 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC6P09630 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC6P09630 AC092919.2-201ENST00000623631 1645 ntBASIC19.65■□□□□ 0.74
HOXC6P09630 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC6P09630 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXC6P09630 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.64■□□□□ 0.74
HOXC6P09630 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
HOXC6P09630 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.64■□□□□ 0.74
HOXC6P09630 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
HOXC6P09630 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXC6P09630 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC6P09630 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC6P09630 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXC6P09630 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
HOXC6P09630 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.64■□□□□ 0.73
HOXC6P09630 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXC6P09630 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXC6P09630 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC6P09630 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HOXC6P09630 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.64■□□□□ 0.73
HOXC6P09630 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC6P09630 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
HOXC6P09630 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXC6P09630 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC6P09630 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HOXC6P09630 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXC6P09630 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HOXC6P09630 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC6P09630 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC6P09630 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.64■□□□□ 0.73
HOXC6P09630 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC6P09630 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC6P09630 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC6P09630 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC6P09630 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC6P09630 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC6P09630 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC6P09630 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC6P09630 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC6P09630 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC6P09630 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC6P09630 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC6P09630 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC6P09630 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC6P09630 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HOXC6P09630 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HOXC6P09630 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC6P09630 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.63■□□□□ 0.73
HOXC6P09630 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
HOXC6P09630 COX20P2-201ENST00000452636 358 ntBASIC19.63■□□□□ 0.73
HOXC6P09630 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC6P09630 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.63■□□□□ 0.73
HOXC6P09630 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC6P09630 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.63■□□□□ 0.73
HOXC6P09630 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC6P09630 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HOXC6P09630 LINC00628-201ENST00000628516 1289 ntBASIC19.63■□□□□ 0.73
HOXC6P09630 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC6P09630 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC6P09630 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC6P09630 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC6P09630 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC6P09630 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC6P09630 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC6P09630 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC6P09630 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC6P09630 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC6P09630 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC6P09630 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC6P09630 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
HOXC6P09630 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC6P09630 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC6P09630 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC6P09630 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.62■□□□□ 0.73
HOXC6P09630 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXC6P09630 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HOXC6P09630 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC6P09630 AC093520.2-201ENST00000561830 333 ntBASIC19.62■□□□□ 0.73
HOXC6P09630 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC6P09630 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
HOXC6P09630 AC005498.2-205ENST00000593218 784 ntBASIC19.62■□□□□ 0.73
HOXC6P09630 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HOXC6P09630 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms