Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
HTR1AP08908 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HTR1AP08908 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HTR1AP08908 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16■□□□□ 0.15
HTR1AP08908 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HTR1AP08908 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16■□□□□ 0.15
HTR1AP08908 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HTR1AP08908 KRT18P23-201ENST00000435622 1283 ntBASIC16■□□□□ 0.15
HTR1AP08908 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16■□□□□ 0.15
HTR1AP08908 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16■□□□□ 0.15
HTR1AP08908 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16■□□□□ 0.15
HTR1AP08908 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16■□□□□ 0.15
HTR1AP08908 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16■□□□□ 0.15
HTR1AP08908 AC009065.1-201ENST00000564055 1225 ntBASIC16■□□□□ 0.15
HTR1AP08908 MIR4674-201ENST00000582457 87 ntBASIC16■□□□□ 0.15
HTR1AP08908 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16■□□□□ 0.15
HTR1AP08908 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HTR1AP08908 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16■□□□□ 0.15
HTR1AP08908 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16■□□□□ 0.15
HTR1AP08908 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HTR1AP08908 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16■□□□□ 0.15
HTR1AP08908 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HTR1AP08908 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16■□□□□ 0.15
HTR1AP08908 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16■□□□□ 0.15
HTR1AP08908 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
HTR1AP08908 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
HTR1AP08908 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HTR1AP08908 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HTR1AP08908 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HTR1AP08908 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16■□□□□ 0.15
HTR1AP08908 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16■□□□□ 0.15
HTR1AP08908 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HTR1AP08908 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.99■□□□□ 0.15
HTR1AP08908 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.99■□□□□ 0.15
HTR1AP08908 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HTR1AP08908 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.99■□□□□ 0.15
HTR1AP08908 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HTR1AP08908 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.99■□□□□ 0.15
HTR1AP08908 AC022898.2-201ENST00000616822 1312 ntBASIC15.99■□□□□ 0.15
HTR1AP08908 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HTR1AP08908 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.99■□□□□ 0.15
HTR1AP08908 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HTR1AP08908 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.99■□□□□ 0.15
HTR1AP08908 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.99■□□□□ 0.15
HTR1AP08908 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.99■□□□□ 0.15
HTR1AP08908 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.99■□□□□ 0.15
HTR1AP08908 PAUPAR-201ENST00000630360 2965 ntBASIC15.99■□□□□ 0.15
HTR1AP08908 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 KRT8P7-201ENST00000533003 1432 ntBASIC15.99■□□□□ 0.15
HTR1AP08908 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.99■□□□□ 0.15
HTR1AP08908 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.99■□□□□ 0.15
HTR1AP08908 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.99■□□□□ 0.15
HTR1AP08908 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
HTR1AP08908 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HTR1AP08908 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HTR1AP08908 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HTR1AP08908 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HTR1AP08908 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.98■□□□□ 0.15
HTR1AP08908 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.98■□□□□ 0.15
HTR1AP08908 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
HTR1AP08908 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
HTR1AP08908 SLC25A1P3-201ENST00000395415 828 ntBASIC15.98■□□□□ 0.15
HTR1AP08908 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HTR1AP08908 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.98■□□□□ 0.15
HTR1AP08908 AC116562.2-201ENST00000507042 360 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms