Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.96■□□□□ 0.79
TPM2P07951 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.96■□□□□ 0.79
TPM2P07951 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TPM2P07951 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TPM2P07951 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.96■□□□□ 0.79
TPM2P07951 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.96■□□□□ 0.79
TPM2P07951 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.96■□□□□ 0.79
TPM2P07951 MIR4785-201ENST00000585005 73 ntBASIC19.96■□□□□ 0.79
TPM2P07951 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.96■□□□□ 0.79
TPM2P07951 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.96■□□□□ 0.79
TPM2P07951 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.96■□□□□ 0.79
TPM2P07951 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TPM2P07951 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.96■□□□□ 0.79
TPM2P07951 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.96■□□□□ 0.79
TPM2P07951 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM2P07951 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.96■□□□□ 0.79
TPM2P07951 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
TPM2P07951 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.96■□□□□ 0.79
TPM2P07951 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM2P07951 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.95■□□□□ 0.78
TPM2P07951 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM2P07951 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.95■□□□□ 0.78
TPM2P07951 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TPM2P07951 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TPM2P07951 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
TPM2P07951 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.95■□□□□ 0.78
TPM2P07951 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM2P07951 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM2P07951 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM2P07951 LYSMD4-203ENST00000378904 2122 ntBASIC19.95■□□□□ 0.78
TPM2P07951 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.95■□□□□ 0.78
TPM2P07951 RBM17P1-201ENST00000453646 1190 ntBASIC19.95■□□□□ 0.78
TPM2P07951 AC104390.1-201ENST00000555663 520 ntBASIC19.95■□□□□ 0.78
TPM2P07951 C2orf69P3-201ENST00000565542 1120 ntBASIC19.95■□□□□ 0.78
TPM2P07951 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TPM2P07951 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM2P07951 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM2P07951 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TPM2P07951 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TPM2P07951 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.95■□□□□ 0.78
TPM2P07951 KRT18P55-202ENST00000578578 1546 ntBASIC19.95■□□□□ 0.78
TPM2P07951 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM2P07951 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM2P07951 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM2P07951 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM2P07951 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TPM2P07951 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.95■□□□□ 0.78
TPM2P07951 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TPM2P07951 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TPM2P07951 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM2P07951 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM2P07951 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM2P07951 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TPM2P07951 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TPM2P07951 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM2P07951 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
TPM2P07951 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TPM2P07951 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM2P07951 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM2P07951 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TPM2P07951 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM2P07951 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.94■□□□□ 0.78
TPM2P07951 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM2P07951 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.94■□□□□ 0.78
TPM2P07951 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM2P07951 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM2P07951 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.94■□□□□ 0.78
TPM2P07951 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM2P07951 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TPM2P07951 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.94■□□□□ 0.78
TPM2P07951 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.94■□□□□ 0.78
TPM2P07951 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.94■□□□□ 0.78
TPM2P07951 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TPM2P07951 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TPM2P07951 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
TPM2P07951 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM2P07951 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.94■□□□□ 0.78
TPM2P07951 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM2P07951 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM2P07951 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TPM2P07951 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms