Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA1P02708 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA1P02708 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.93■□□□□ 0.62
CHRNA1P02708 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA1P02708 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.93■□□□□ 0.62
CHRNA1P02708 ACTG1P14-201ENST00000446382 1122 ntBASIC18.93■□□□□ 0.62
CHRNA1P02708 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNA1P02708 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CHRNA1P02708 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CHRNA1P02708 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.93■□□□□ 0.62
CHRNA1P02708 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNA1P02708 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.93■□□□□ 0.62
CHRNA1P02708 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNA1P02708 LINC02084-201ENST00000606069 1096 ntBASIC18.93■□□□□ 0.62
CHRNA1P02708 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA1P02708 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CHRNA1P02708 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA1P02708 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA1P02708 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA1P02708 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CHRNA1P02708 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CHRNA1P02708 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNA1P02708 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CHRNA1P02708 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA1P02708 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA1P02708 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA1P02708 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CHRNA1P02708 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHRNA1P02708 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA1P02708 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA1P02708 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA1P02708 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA1P02708 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA1P02708 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.92■□□□□ 0.62
CHRNA1P02708 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CHRNA1P02708 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.92■□□□□ 0.62
CHRNA1P02708 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA1P02708 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA1P02708 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA1P02708 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.92■□□□□ 0.62
CHRNA1P02708 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.92■□□□□ 0.62
CHRNA1P02708 ACTL9-202ENST00000612068 1252 ntBASIC18.92■□□□□ 0.62
CHRNA1P02708 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.92■□□□□ 0.62
CHRNA1P02708 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.92■□□□□ 0.62
CHRNA1P02708 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.92■□□□□ 0.62
CHRNA1P02708 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA1P02708 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.92■□□□□ 0.62
CHRNA1P02708 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.92■□□□□ 0.62
CHRNA1P02708 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA1P02708 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA1P02708 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA1P02708 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA1P02708 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CHRNA1P02708 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA1P02708 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CHRNA1P02708 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA1P02708 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA1P02708 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA1P02708 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA1P02708 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CHRNA1P02708 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.91■□□□□ 0.62
CHRNA1P02708 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA1P02708 AL645939.2-201ENST00000427340 991 ntBASIC18.91■□□□□ 0.62
CHRNA1P02708 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.91■□□□□ 0.62
CHRNA1P02708 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA1P02708 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.91■□□□□ 0.62
CHRNA1P02708 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.91■□□□□ 0.62
CHRNA1P02708 AL139327.4-201ENST00000612362 153 ntBASIC18.91■□□□□ 0.62
CHRNA1P02708 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA1P02708 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA1P02708 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA1P02708 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA1P02708 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA1P02708 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA1P02708 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA1P02708 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA1P02708 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA1P02708 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CHRNA1P02708 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.9■□□□□ 0.62
CHRNA1P02708 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA1P02708 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA1P02708 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
CHRNA1P02708 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA1P02708 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CHRNA1P02708 AC092919.2-201ENST00000623631 1645 ntBASIC18.9■□□□□ 0.62
CHRNA1P02708 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA1P02708 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA1P02708 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.9■□□□□ 0.62
CHRNA1P02708 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CHRNA1P02708 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA1P02708 SLC25A6P2-201ENST00000497974 877 ntBASIC18.9■□□□□ 0.62
CHRNA1P02708 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CHRNA1P02708 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CHRNA1P02708 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA1P02708 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.9■□□□□ 0.62
CHRNA1P02708 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA1P02708 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA1P02708 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA1P02708 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.9■□□□□ 0.62
CHRNA1P02708 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms