Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HLA-DRAP01903 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DRAP01903 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DRAP01903 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DRAP01903 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.8■□□□□ 0.6
HLA-DRAP01903 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 SPDYE21P-201ENST00000413323 827 ntBASIC18.8■□□□□ 0.6
HLA-DRAP01903 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.8■□□□□ 0.6
HLA-DRAP01903 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DRAP01903 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HLA-DRAP01903 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 REXO1L6P-202ENST00000619970 1078 ntBASIC18.8■□□□□ 0.6
HLA-DRAP01903 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DRAP01903 AC148477.5-201ENST00000625164 1645 ntBASIC18.8■□□□□ 0.6
HLA-DRAP01903 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DRAP01903 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DRAP01903 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DRAP01903 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DRAP01903 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DRAP01903 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DRAP01903 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DRAP01903 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
HLA-DRAP01903 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRAP01903 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DRAP01903 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRAP01903 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRAP01903 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DRAP01903 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRAP01903 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRAP01903 AC079776.2-201ENST00000641154 1609 ntBASIC18.79■□□□□ 0.6
HLA-DRAP01903 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DRAP01903 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HLA-DRAP01903 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRAP01903 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRAP01903 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DRAP01903 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.79■□□□□ 0.6
HLA-DRAP01903 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DRAP01903 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
HLA-DRAP01903 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DRAP01903 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRAP01903 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRAP01903 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DRAP01903 LINC01711-201ENST00000598340 967 ntBASIC18.79■□□□□ 0.6
HLA-DRAP01903 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DRAP01903 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRAP01903 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRAP01903 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.79■□□□□ 0.6
HLA-DRAP01903 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRAP01903 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRAP01903 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HLA-DRAP01903 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRAP01903 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRAP01903 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRAP01903 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRAP01903 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRAP01903 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HLA-DRAP01903 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRAP01903 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HLA-DRAP01903 AL023806.1-201ENST00000603994 1649 ntBASIC18.78■□□□□ 0.6
HLA-DRAP01903 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRAP01903 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DRAP01903 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HLA-DRAP01903 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRAP01903 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRAP01903 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HLA-DRAP01903 AC016396.2-201ENST00000562575 1417 ntBASIC18.78■□□□□ 0.6
HLA-DRAP01903 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DRAP01903 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DRAP01903 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRAP01903 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
HLA-DRAP01903 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
HLA-DRAP01903 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DRAP01903 RBM17P3-201ENST00000417687 1192 ntBASIC18.78■□□□□ 0.6
HLA-DRAP01903 AL020989.1-201ENST00000422979 469 ntBASIC18.78■□□□□ 0.6
HLA-DRAP01903 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
HLA-DRAP01903 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRAP01903 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRAP01903 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DRAP01903 MTDHP3-201ENST00000594186 672 ntBASIC18.78■□□□□ 0.6
HLA-DRAP01903 AC073592.4-201ENST00000623827 446 ntBASIC18.78■□□□□ 0.6
HLA-DRAP01903 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DRAP01903 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRAP01903 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRAP01903 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
HLA-DRAP01903 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HLA-DRAP01903 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms