Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRP01130 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LDLRP01130 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LDLRP01130 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.95■□□□□ 0.3
LDLRP01130 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.95■□□□□ 0.3
LDLRP01130 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.95■□□□□ 0.3
LDLRP01130 AP002383.4-201ENST00000442518 975 ntBASIC16.95■□□□□ 0.3
LDLRP01130 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.95■□□□□ 0.3
LDLRP01130 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.95■□□□□ 0.3
LDLRP01130 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.95■□□□□ 0.3
LDLRP01130 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LDLRP01130 AC104692.2-201ENST00000603054 253 ntBASIC16.95■□□□□ 0.3
LDLRP01130 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.95■□□□□ 0.3
LDLRP01130 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.95■□□□□ 0.3
LDLRP01130 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.95■□□□□ 0.3
LDLRP01130 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.95■□□□□ 0.3
LDLRP01130 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRP01130 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRP01130 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRP01130 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRP01130 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LDLRP01130 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRP01130 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.95■□□□□ 0.3
LDLRP01130 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.95■□□□□ 0.3
LDLRP01130 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRP01130 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.95■□□□□ 0.3
LDLRP01130 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.94■□□□□ 0.3
LDLRP01130 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.94■□□□□ 0.3
LDLRP01130 CROCCP2-202ENST00000412962 2773 ntBASIC16.94■□□□□ 0.3
LDLRP01130 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LDLRP01130 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LDLRP01130 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LDLRP01130 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LDLRP01130 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.94■□□□□ 0.3
LDLRP01130 EMBP1-201ENST00000458200 901 ntBASIC16.94■□□□□ 0.3
LDLRP01130 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.94■□□□□ 0.3
LDLRP01130 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.94■□□□□ 0.3
LDLRP01130 AC034236.2-201ENST00000606662 1610 ntBASIC16.94■□□□□ 0.3
LDLRP01130 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LDLRP01130 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.94■□□□□ 0.3
LDLRP01130 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.94■□□□□ 0.3
LDLRP01130 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.94■□□□□ 0.3
LDLRP01130 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.94■□□□□ 0.3
LDLRP01130 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRP01130 AC133963.1-201ENST00000504166 1679 ntBASIC16.94■□□□□ 0.3
LDLRP01130 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRP01130 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.93■□□□□ 0.3
LDLRP01130 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.93■□□□□ 0.3
LDLRP01130 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LDLRP01130 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRP01130 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRP01130 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRP01130 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.93■□□□□ 0.3
LDLRP01130 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LDLRP01130 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.93■□□□□ 0.3
LDLRP01130 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
LDLRP01130 AC099343.3-201ENST00000605834 2503 ntBASIC16.93■□□□□ 0.3
LDLRP01130 SDHAP2-201ENST00000455183 2001 ntBASIC16.93■□□□□ 0.3
LDLRP01130 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
LDLRP01130 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LDLRP01130 AC092597.1-201ENST00000487352 616 ntBASIC16.93■□□□□ 0.3
LDLRP01130 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.93■□□□□ 0.3
LDLRP01130 AL160237.2-201ENST00000556165 472 ntBASIC16.93■□□□□ 0.3
LDLRP01130 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.93■□□□□ 0.3
LDLRP01130 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRP01130 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
LDLRP01130 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRP01130 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
LDLRP01130 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRP01130 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.93■□□□□ 0.3
LDLRP01130 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LDLRP01130 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRP01130 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LDLRP01130 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRP01130 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRP01130 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRP01130 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.93■□□□□ 0.3
LDLRP01130 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
LDLRP01130 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms