Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSPG5O95196 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.76■□□□□ 0.59
CSPG5O95196 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.76■□□□□ 0.59
CSPG5O95196 PHGDH-209ENST00000641074 1780 ntBASIC18.76■□□□□ 0.59
CSPG5O95196 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSPG5O95196 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.76■□□□□ 0.59
CSPG5O95196 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.76■□□□□ 0.59
CSPG5O95196 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSPG5O95196 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSPG5O95196 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSPG5O95196 KLF4P1-201ENST00000412782 1185 ntBASIC18.76■□□□□ 0.59
CSPG5O95196 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.76■□□□□ 0.59
CSPG5O95196 HCG4B-203ENST00000450128 991 ntBASIC18.76■□□□□ 0.59
CSPG5O95196 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.76■□□□□ 0.59
CSPG5O95196 AL031432.2-201ENST00000566714 459 ntBASIC18.76■□□□□ 0.59
CSPG5O95196 AL928711.1-201ENST00000570165 459 ntBASIC18.76■□□□□ 0.59
CSPG5O95196 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.76■□□□□ 0.59
CSPG5O95196 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.76■□□□□ 0.59
CSPG5O95196 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSPG5O95196 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CSPG5O95196 ELL2P1-201ENST00000413990 1906 ntBASIC18.76■□□□□ 0.59
CSPG5O95196 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.76■□□□□ 0.59
CSPG5O95196 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSPG5O95196 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSPG5O95196 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSPG5O95196 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.76■□□□□ 0.59
CSPG5O95196 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CSPG5O95196 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.75■□□□□ 0.59
CSPG5O95196 SIGLEC16-201ENST00000599858 1437 ntBASIC18.75■□□□□ 0.59
CSPG5O95196 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CSPG5O95196 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.75■□□□□ 0.59
CSPG5O95196 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 MIR770-201ENST00000390219 98 ntBASIC18.75■□□□□ 0.59
CSPG5O95196 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.75■□□□□ 0.59
CSPG5O95196 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 AC096633.1-201ENST00000422446 749 ntBASIC18.75■□□□□ 0.59
CSPG5O95196 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.75■□□□□ 0.59
CSPG5O95196 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.75■□□□□ 0.59
CSPG5O95196 AC122714.2-201ENST00000502787 707 ntBASIC18.75■□□□□ 0.59
CSPG5O95196 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.75■□□□□ 0.59
CSPG5O95196 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CSPG5O95196 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 AC011467.4-201ENST00000594891 528 ntBASIC18.75■□□□□ 0.59
CSPG5O95196 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.75■□□□□ 0.59
CSPG5O95196 AC010507.1-201ENST00000633895 436 ntBASIC18.75■□□□□ 0.59
CSPG5O95196 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CSPG5O95196 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CSPG5O95196 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CSPG5O95196 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CSPG5O95196 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG5O95196 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.75■□□□□ 0.59
CSPG5O95196 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CSPG5O95196 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG5O95196 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG5O95196 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.74■□□□□ 0.59
CSPG5O95196 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG5O95196 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG5O95196 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
CSPG5O95196 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG5O95196 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG5O95196 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.74■□□□□ 0.59
CSPG5O95196 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG5O95196 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG5O95196 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG5O95196 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG5O95196 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG5O95196 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG5O95196 IGLL3P-201ENST00000412472 434 ntBASIC18.74■□□□□ 0.59
CSPG5O95196 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.74■□□□□ 0.59
CSPG5O95196 FAM58CP-201ENST00000435741 640 ntBASIC18.74■□□□□ 0.59
CSPG5O95196 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG5O95196 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.74■□□□□ 0.59
CSPG5O95196 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
CSPG5O95196 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CSPG5O95196 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.74■□□□□ 0.59
CSPG5O95196 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.74■□□□□ 0.59
CSPG5O95196 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.74■□□□□ 0.59
CSPG5O95196 AC004877.2-201ENST00000623941 599 ntBASIC18.74■□□□□ 0.59
CSPG5O95196 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG5O95196 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG5O95196 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CSPG5O95196 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.74■□□□□ 0.59
CSPG5O95196 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.74■□□□□ 0.59
CSPG5O95196 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms