Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.26■□□□□ 0.03
UPK1BO75841 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
UPK1BO75841 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.26■□□□□ 0.03
UPK1BO75841 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.26■□□□□ 0.03
UPK1BO75841 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
UPK1BO75841 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
UPK1BO75841 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
UPK1BO75841 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.26■□□□□ 0.03
UPK1BO75841 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
UPK1BO75841 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
UPK1BO75841 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.26■□□□□ 0.03
UPK1BO75841 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
UPK1BO75841 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1BO75841 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1BO75841 AL009178.2-201ENST00000597278 2719 ntBASIC15.25■□□□□ 0.03
UPK1BO75841 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1BO75841 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1BO75841 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK1BO75841 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
UPK1BO75841 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
UPK1BO75841 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
UPK1BO75841 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK1BO75841 AL024508.2-201ENST00000607749 1894 ntBASIC15.25■□□□□ 0.03
UPK1BO75841 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
UPK1BO75841 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1BO75841 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1BO75841 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK1BO75841 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1BO75841 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.25■□□□□ 0.03
UPK1BO75841 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
UPK1BO75841 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
UPK1BO75841 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.25■□□□□ 0.03
UPK1BO75841 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.25■□□□□ 0.03
UPK1BO75841 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1BO75841 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK1BO75841 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
UPK1BO75841 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1BO75841 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.25■□□□□ 0.03
UPK1BO75841 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
UPK1BO75841 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1BO75841 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK1BO75841 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK1BO75841 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1BO75841 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
UPK1BO75841 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1BO75841 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1BO75841 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1BO75841 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
UPK1BO75841 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.24■□□□□ 0.03
UPK1BO75841 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1BO75841 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1BO75841 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
UPK1BO75841 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1BO75841 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.24■□□□□ 0.03
UPK1BO75841 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
UPK1BO75841 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.24■□□□□ 0.03
UPK1BO75841 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1BO75841 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
UPK1BO75841 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1BO75841 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.24■□□□□ 0.03
UPK1BO75841 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1BO75841 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.24■□□□□ 0.03
UPK1BO75841 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
UPK1BO75841 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1BO75841 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1BO75841 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.24■□□□□ 0.03
UPK1BO75841 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1BO75841 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1BO75841 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.24■□□□□ 0.03
UPK1BO75841 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
UPK1BO75841 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1BO75841 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1BO75841 LINC01311-201ENST00000565162 1445 ntBASIC15.24■□□□□ 0.03
UPK1BO75841 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1BO75841 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.24■□□□□ 0.03
UPK1BO75841 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
UPK1BO75841 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
UPK1BO75841 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.24■□□□□ 0.03
UPK1BO75841 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1BO75841 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
UPK1BO75841 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.23■□□□□ 0.03
UPK1BO75841 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.23■□□□□ 0.03
UPK1BO75841 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms