Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH16O75309 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH16O75309 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CDH16O75309 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CDH16O75309 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH16O75309 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH16O75309 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH16O75309 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
CDH16O75309 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH16O75309 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH16O75309 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH16O75309 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDH16O75309 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.71■□□□□ 0.42
CDH16O75309 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDH16O75309 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.71■□□□□ 0.42
CDH16O75309 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.71■□□□□ 0.42
CDH16O75309 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH16O75309 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH16O75309 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDH16O75309 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH16O75309 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH16O75309 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH16O75309 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH16O75309 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH16O75309 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDH16O75309 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH16O75309 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDH16O75309 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH16O75309 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDH16O75309 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.7■□□□□ 0.42
CDH16O75309 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH16O75309 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH16O75309 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH16O75309 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH16O75309 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH16O75309 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH16O75309 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH16O75309 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH16O75309 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH16O75309 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH16O75309 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH16O75309 AC093525.9-201ENST00000624961 1746 ntBASIC17.69■□□□□ 0.42
CDH16O75309 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH16O75309 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH16O75309 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH16O75309 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDH16O75309 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CDH16O75309 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH16O75309 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH16O75309 CICP6-201ENST00000457191 2729 ntBASIC17.69■□□□□ 0.42
CDH16O75309 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH16O75309 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH16O75309 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH16O75309 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH16O75309 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDH16O75309 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CDH16O75309 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH16O75309 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH16O75309 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH16O75309 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH16O75309 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH16O75309 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH16O75309 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH16O75309 AL162727.3-201ENST00000635661 2787 ntBASIC17.69■□□□□ 0.42
CDH16O75309 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH16O75309 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH16O75309 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH16O75309 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CDH16O75309 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH16O75309 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH16O75309 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH16O75309 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH16O75309 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH16O75309 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH16O75309 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH16O75309 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH16O75309 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH16O75309 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH16O75309 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH16O75309 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH16O75309 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH16O75309 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH16O75309 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH16O75309 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH16O75309 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH16O75309 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH16O75309 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH16O75309 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH16O75309 TSPY14P-201ENST00000303979 915 ntBASIC17.68■□□□□ 0.42
CDH16O75309 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDH16O75309 SLC25A1P3-201ENST00000395415 828 ntBASIC17.68■□□□□ 0.42
CDH16O75309 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH16O75309 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.68■□□□□ 0.42
CDH16O75309 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH16O75309 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH16O75309 AL512604.3-201ENST00000569583 964 ntBASIC17.68■□□□□ 0.42
CDH16O75309 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH16O75309 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH16O75309 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDH16O75309 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms