Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
LCMT2O60294 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LCMT2O60294 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.74■□□□□ 0.27
LCMT2O60294 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LCMT2O60294 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.74■□□□□ 0.27
LCMT2O60294 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LCMT2O60294 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LCMT2O60294 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LCMT2O60294 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LCMT2O60294 AC004817.3-201ENST00000602957 2129 ntBASIC16.73■□□□□ 0.27
LCMT2O60294 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.73■□□□□ 0.27
LCMT2O60294 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LCMT2O60294 CROCCP2-202ENST00000412962 2773 ntBASIC16.73■□□□□ 0.27
LCMT2O60294 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.73■□□□□ 0.27
LCMT2O60294 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LCMT2O60294 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LCMT2O60294 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LCMT2O60294 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.73■□□□□ 0.27
LCMT2O60294 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LCMT2O60294 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LCMT2O60294 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LCMT2O60294 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.73■□□□□ 0.27
LCMT2O60294 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LCMT2O60294 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LCMT2O60294 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LCMT2O60294 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
LCMT2O60294 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LCMT2O60294 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
LCMT2O60294 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.73■□□□□ 0.27
LCMT2O60294 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.73■□□□□ 0.27
LCMT2O60294 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LCMT2O60294 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.73■□□□□ 0.27
LCMT2O60294 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LCMT2O60294 LINC01711-201ENST00000598340 967 ntBASIC16.73■□□□□ 0.27
LCMT2O60294 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LCMT2O60294 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.73■□□□□ 0.27
LCMT2O60294 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LCMT2O60294 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LCMT2O60294 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LCMT2O60294 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LCMT2O60294 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.72■□□□□ 0.27
LCMT2O60294 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
LCMT2O60294 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LCMT2O60294 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 AC148477.5-201ENST00000625164 1645 ntBASIC16.72■□□□□ 0.27
LCMT2O60294 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.72■□□□□ 0.27
LCMT2O60294 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.72■□□□□ 0.27
LCMT2O60294 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.72■□□□□ 0.27
LCMT2O60294 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LCMT2O60294 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.72■□□□□ 0.27
LCMT2O60294 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.72■□□□□ 0.27
LCMT2O60294 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 AL355877.3-201ENST00000622820 899 ntBASIC16.72■□□□□ 0.27
LCMT2O60294 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LCMT2O60294 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 AC009336.1-201ENST00000608941 1553 ntBASIC16.72■□□□□ 0.27
LCMT2O60294 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.72■□□□□ 0.27
LCMT2O60294 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LCMT2O60294 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.71■□□□□ 0.27
LCMT2O60294 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.71■□□□□ 0.27
LCMT2O60294 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.71■□□□□ 0.27
LCMT2O60294 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.71■□□□□ 0.27
LCMT2O60294 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.71■□□□□ 0.27
LCMT2O60294 AC079776.2-201ENST00000641154 1609 ntBASIC16.71■□□□□ 0.27
LCMT2O60294 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.71■□□□□ 0.27
LCMT2O60294 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 AC046185.3-201ENST00000623228 1824 ntBASIC16.71■□□□□ 0.27
LCMT2O60294 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 AC003669.1-201ENST00000334569 611 ntBASIC16.71■□□□□ 0.27
LCMT2O60294 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.71■□□□□ 0.27
LCMT2O60294 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
LCMT2O60294 KLF4P1-201ENST00000412782 1185 ntBASIC16.71■□□□□ 0.27
LCMT2O60294 SPDYE21P-201ENST00000413323 827 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms