Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PCDH7O60245 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDH7O60245 VENTXP7-201ENST00000475503 772 ntBASIC16.73■□□□□ 0.27
PCDH7O60245 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDH7O60245 AC087388.1-201ENST00000571370 1112 ntBASIC16.73■□□□□ 0.27
PCDH7O60245 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDH7O60245 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PCDH7O60245 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH7O60245 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
PCDH7O60245 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDH7O60245 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PCDH7O60245 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDH7O60245 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDH7O60245 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
PCDH7O60245 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDH7O60245 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PCDH7O60245 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDH7O60245 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 MYCLP1-201ENST00000372451 1075 ntBASIC16.72■□□□□ 0.27
PCDH7O60245 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 AC246785.2-201ENST00000432512 513 ntBASIC16.72■□□□□ 0.27
PCDH7O60245 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
PCDH7O60245 IGHV3-52-201ENST00000519770 353 ntBASIC16.72■□□□□ 0.27
PCDH7O60245 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 AC109462.3-201ENST00000573934 613 ntBASIC16.72■□□□□ 0.27
PCDH7O60245 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDH7O60245 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDH7O60245 AC019129.2-201ENST00000609837 1235 ntBASIC16.72■□□□□ 0.27
PCDH7O60245 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDH7O60245 AL590326.2-201ENST00000625139 305 ntBASIC16.72■□□□□ 0.27
PCDH7O60245 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH7O60245 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PCDH7O60245 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCDH7O60245 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.71■□□□□ 0.27
PCDH7O60245 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH7O60245 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDH7O60245 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH7O60245 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH7O60245 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDH7O60245 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PCDH7O60245 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDH7O60245 AC122714.2-201ENST00000502787 707 ntBASIC16.71■□□□□ 0.27
PCDH7O60245 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDH7O60245 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDH7O60245 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDH7O60245 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PCDH7O60245 AC116407.4-201ENST00000623319 1061 ntBASIC16.71■□□□□ 0.27
PCDH7O60245 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PCDH7O60245 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PCDH7O60245 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 AC016734.2-201ENST00000624325 1377 ntBASIC16.71■□□□□ 0.27
PCDH7O60245 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDH7O60245 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCDH7O60245 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCDH7O60245 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH7O60245 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH7O60245 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms